Gene Bcav_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2272 
Symbol 
ID7861884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2554116 
End bp2554952 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID643866365 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002882285 
Protein GI229820759 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGA CCTCGAGCCT GCTCTGGCTG CGGTACGTCC TGCTCACGAT CGCCGCGCTG 
ATGTTCGCGT TCCCGTTCTA CTTCATGGTG GTCGGCGCCT TCCAGGAGAA CCCGACGAAC
ACACCCGACC AGCTCGTGCC GCAGTCGGGA TGGACGACCC AGAACTTCAC GAACATCGAC
TCACGGATCG ACCTTGCCGG TTCGCTCGTG AACTCCCTCG TGTTCACAGC GGGCGTGCTG
CTGGGGACCG TCGTGTTCGG GCTGCTCGCC GGCTACGCCA TGGGCCGGCT GGACTTCCGC
GGTCGCGGCG TGACCTGGGT GCTCATGCTG CTCGTGCAGA TGGTGCCGTT CCAGCTGCTC
ATGATCCCGC TGTACGTGCA GATCACCAGC AGCTACGGGC TCGGCGACAC GTACCTCGGG
ATGATCCTGC CGTTCGCGAT CAACACGACG GCGGTGTTCA TCTTCACGCA GTTCTTCCGT
GCGCTGCCGC GCGAGATGTT CGAGGCGGCG CGCATCGACG GCGCGAGCGA GCTGCGGATC
CTCCGGTCGA TCGCCGTGCC GCTGGTGAGG CCGGCCATCG CGACGGTCGT GCTCGTGACG
TTCATCGGCC CGTGGAACGA GTTCCTCTGG CCGTTCCTCA TCACGAAGGA CTCCTCGATG
CAGCCGCTCG CGGTCTCGCT GGCGAACTAC ATCTCCAACG TCGCGCAGTC GACGTCCAAC
GCCAACGGCG CGATCCTCGC GGGTGCGACC GCCCTGGCGT TCCCCGTCGT CATCCTGTTC
TGCCTGTTCC AGCGGTACTT CACCGCCTCC GACCTCGGCG CCGCCGTGAA GGGCTGA
 
Protein sequence
MRQTSSLLWL RYVLLTIAAL MFAFPFYFMV VGAFQENPTN TPDQLVPQSG WTTQNFTNID 
SRIDLAGSLV NSLVFTAGVL LGTVVFGLLA GYAMGRLDFR GRGVTWVLML LVQMVPFQLL
MIPLYVQITS SYGLGDTYLG MILPFAINTT AVFIFTQFFR ALPREMFEAA RIDGASELRI
LRSIAVPLVR PAIATVVLVT FIGPWNEFLW PFLITKDSSM QPLAVSLANY ISNVAQSTSN
ANGAILAGAT ALAFPVVILF CLFQRYFTAS DLGAAVKG