| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2240 |
|---|
| Symbol | |
|---|
| ID | 7861436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2519104 |
|---|
| End bp | 2520708 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643866332 |
|---|
| Product | protein of unknown function DUF245 domain protein |
|---|
| Protein accession | YP_002882253 |
|---|
| Protein GI | 229820727 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.329209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTGC GCCGGATCAT GGGGATCGAG ACCGAGTACG GGATCCTCGG CGGCGACGGC
GTCCGGCAGG GTCCGATGGC GCTGTCAGCG ATCGTCGTCG CGGCCTACGC CGACCGCACC
CGGCGTGCGG GACGCACCCG GTGGAGCTAC GAGGACGAGG ACCCGCTCCG CGACGCGCGG
GGCTGGCGCC TCGACCGGGC CAGCGCGCAC CCCAGCCAGC TGACCGACCG TCCGGCGGTC
GCGGCGCCGT CCGGCCCGAA CGCCGTCACC CACCGCCGCC GCCCGGGCGA CGGCGAGCGC
GAGGACCCGG CGGCCGCGAA CGTCATCCTC ACCAACGGCG CCCGGCTGTA CGTCGACCAC
GCGCACCCCG AGTACTCGAG CCCCGAGGTC ACGAACCCGC TCGACGGCGT CCTCTGGGAC
CGCGCCGGCG AACGCGTCAT GCTCGACGCC GTCCGCTCGC TCACCACGTC ACCGGCGCTG
CCCGACGTCG CGCTCTACAA GAACAACGTC GACGGCAAGG GCGCGACGTA CGGGACCCAC
GAGAACTACC TCATGGACCG GTCCGTGCCG TTCGGCGACG TGGTGCGCTA CCTGACGCCG
TTCCTCGTCA CCCGCCAGGT CTTCACCGGC TCCGGACGCG TGGGCATCGG CCCCGCCGGC
CAGGTCCCCG GGTTCCAGCT CTCCCAGCGG GCCGACTACA TCGAGGCGGA GGTCGGCCTC
GAGACGACCC TGCGCCGGCC GATCGTCAAC ACGCGCGACG AGCCGCACGC AGACCCGGAG
AAGTACCGCC GCCTGCACGT CATCGTGGGC GACGCGAACT GCCTCGAGGT GGCCACGTAC
CTCAAGCTCG GGACGTGCGC GCTGGTGCTG TGGATGCTCG AGACCGGGCG CGTGCCCCTC
GCGTGGGAGG CGCTGGCGCT CGCCGACCCG GTGGCGGAGT TCCACGCCGT CAGCCACGAC
CTGACGCTGA CCCACCGGCT GACGACGGCG GACGGCCGCG AGCTCACGGC GCTCGAGATC
CAGCGGGTGT ACAGCGCCGG GATCGCCGCC GCCGTCGCGG ACGCCGCCCG CGAGAGCGGG
GAGGCGACGG ACGAGGCGAC GCTGGACGTG CTCGCCAGGT GGAGCTCGCT CCTGGCCCGG
CTCGACGACG ACCCGTCGAC GTGCGCCCGC GAGGTCGAGT GGCTCGCGAA GCTGCGCGTG
CTGGAGGCGA TGCGGCGGCG CGACCACCTC GCGTGGGACC ACCCCAAGCT CGCCGCGCTC
GACCTGCAGT GGTCGGACGT GCGCCCGGAG CGGGGGATCT ACGCGCGCCT GCGGGCGTCC
GGGGCGGTCG AGACCCTCGT CACGGACGAC GACGTCGCCC GCGCGGCCGT GCGTCCGCCG
TCCGACACCC GCGCGTACTT CCGCGGCGAG GTGGTGCGGC GCTACCCGGA CCAGGTGGCG
GCGGCGAACT GGGACTGCGT GATCCTGGAC GTCGCCTCCG AGTCGGCACT GCGCCGGGTC
CCCATGCTGG AACCCGAACG GGGGACGCGC GCGCACGTCG GTGCGCTGCT CGACGCCAGC
CCGGACGCGG GGGCGCTCCT CGCAGCCCTG CTCGCGCCCA CTTAG
|
|---|
| Protein sequence | MSVRRIMGIE TEYGILGGDG VRQGPMALSA IVVAAYADRT RRAGRTRWSY EDEDPLRDAR
GWRLDRASAH PSQLTDRPAV AAPSGPNAVT HRRRPGDGER EDPAAANVIL TNGARLYVDH
AHPEYSSPEV TNPLDGVLWD RAGERVMLDA VRSLTTSPAL PDVALYKNNV DGKGATYGTH
ENYLMDRSVP FGDVVRYLTP FLVTRQVFTG SGRVGIGPAG QVPGFQLSQR ADYIEAEVGL
ETTLRRPIVN TRDEPHADPE KYRRLHVIVG DANCLEVATY LKLGTCALVL WMLETGRVPL
AWEALALADP VAEFHAVSHD LTLTHRLTTA DGRELTALEI QRVYSAGIAA AVADAARESG
EATDEATLDV LARWSSLLAR LDDDPSTCAR EVEWLAKLRV LEAMRRRDHL AWDHPKLAAL
DLQWSDVRPE RGIYARLRAS GAVETLVTDD DVARAAVRPP SDTRAYFRGE VVRRYPDQVA
AANWDCVILD VASESALRRV PMLEPERGTR AHVGALLDAS PDAGALLAAL LAPT
|
|---|
| |