Gene Bcav_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2223 
Symbol 
ID7861419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2503771 
End bp2504298 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content74% 
IMG OID643866315 
Producthypothetical protein 
Protein accessionYP_002882236 
Protein GI229820710 
COG category[A] RNA processing and modification 
COG ID[COG5178] U5 snRNP spliceosome subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTACA CGCCACCCCC GCCTCCCGGA CCCAACGACC CGACGTCCGG TGGTTCGCAG 
GGCGGGGTTC CGCCGTACGG CGCGAACCCT CCGGCCCAGC CGCCGAGCGC CCCTCCGCCC
TACGGTGCGA ACCCGCCCGC CCAGCCGCCG AGCGCACCGC CGCCCGGTGG TGGCGTGCCG
CCCTACGGCG GCAGCGGCGG CGGCGTCCCG CCCTACTCCG GCGGTGGCGG CGTTCCCCCG
TACGGCGGTG GCGGCATGGG CGGCCCGGCC GGCTACGGCG GCGGGACGCA GAAGAACTCC
CTCGGCATCT GGGCGCTCGT CTGCGGGATC CTCGGCCTGT GCTGCGGGCC GCTCTCGATC
GTCGGCATCG TGCTGGGCCG TCAGGGCATG GCGGCCGCCG ACCGGGGCGA GGCGAACAAC
CGCGGGCTCG CCCAGGCGGC GTTCATCGTC TCGATCGTGA CCATGGTGCT CTGGATCATC
GGCGTCATCT ACAACGCCAG CACCGGCGGC TTCGACAACA TCTTCTGA
 
Protein sequence
MSYTPPPPPG PNDPTSGGSQ GGVPPYGANP PAQPPSAPPP YGANPPAQPP SAPPPGGGVP 
PYGGSGGGVP PYSGGGGVPP YGGGGMGGPA GYGGGTQKNS LGIWALVCGI LGLCCGPLSI
VGIVLGRQGM AAADRGEANN RGLAQAAFIV SIVTMVLWII GVIYNASTGG FDNIF