Gene Bcav_2204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2204 
Symbol 
ID7861399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2481298 
End bp2482284 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content67% 
IMG OID643866295 
Productinner-membrane translocator 
Protein accessionYP_002882217 
Protein GI229820691 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCT CGGCTCTCGC CACCTCGATC GTCGCGGAGA TGATCTCGCC GACCGCGGCG 
GCCTACGCGC TCGCCGCCAT CGGCCTGAAC ATCCACTTCG GGCTGACCGG CCTCATCAAC
ATGGGCCAGG CGGGGTTCAT GCTGGTCGGC GCGTACGGGT TCGGCATCTC GACGATCGCC
GGCTGGCCGC TGTGGGCGGC CGTGCTCGTG GCCATCGGGT CCGGTGTGGT GTTCGCGCTG
ATCCTCGGCC TGCCGACGCT CAAGCTCCGC GGCGACTACC TCGCCATCGT CACGATCGCG
GCCGCCGAGA TCGTGCGCCT CGTGGGCCGG TCGACGGCGC TCGAGGACAT CACCGGAGCG
TCGAACGGCC TGCTCGGCAA CTCGTTCAAG CACACGTTCC AGGGGGCGTC GCCGTTCCCG
GACGAACGGT GGACGTTCCT GTTCCTCACC CTGCCCGTCA ACGCGTCGAA CAGCTGGTGG
CTGCGCATCG TCGGATGGAC GCTCGTGGCC CTCGCGTGCT TCCTCGTGTA CCTGCTGATC
CGCAGCCCGT GGGGCCGCGT GCTCAAGGGC ATCCGGGAGG ACGAGGACGC CGTCCGCTCG
CTCGGGAAGA ACGTGTACAG CTACAAGATG CAGGCCCTCG TGCTCGGCGG TGGCCTCGGA
GCGCTCGCCG GGATCATCTT CGTGCTGCCG GGCGCGATCC AACCGGACTC CCTCGGCCGA
CCGGTGACGT TCTACACGTG GACGATCCTG CTGCTCGGAG GCGCCGCGAC GGTGTTCGGA
CCCGTGCTGG GGTCGATGCT GTTCTGGGGG ACGCTCGTGT TCGTGCGCGG CCTCATGCGA
GGTGTCATCC CGGAACAGGT GATGTCGGTG ATCGAGATCG AGCAGTTCGG GTGGGTGCTC
GTGGGCATCA CGCTCATGCT GCTCGTGATC TTCAGACCAC AGGGCATCCT CGGCGACAAG
AAGGAGCTCG CGATCCATGA CCGCTGA
 
Protein sequence
MDFSALATSI VAEMISPTAA AYALAAIGLN IHFGLTGLIN MGQAGFMLVG AYGFGISTIA 
GWPLWAAVLV AIGSGVVFAL ILGLPTLKLR GDYLAIVTIA AAEIVRLVGR STALEDITGA
SNGLLGNSFK HTFQGASPFP DERWTFLFLT LPVNASNSWW LRIVGWTLVA LACFLVYLLI
RSPWGRVLKG IREDEDAVRS LGKNVYSYKM QALVLGGGLG ALAGIIFVLP GAIQPDSLGR
PVTFYTWTIL LLGGAATVFG PVLGSMLFWG TLVFVRGLMR GVIPEQVMSV IEIEQFGWVL
VGITLMLLVI FRPQGILGDK KELAIHDR