| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2197 |
|---|
| Symbol | |
|---|
| ID | 7861392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2471830 |
|---|
| End bp | 2473500 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643866289 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002882211 |
|---|
| Protein GI | 229820685 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAGG GGATCAAGGC GGGCGTCGTA GGCGCGGCAG GGCTCGCGCT GGTGCTGTCG
GGATGCGCCT CGCAGCGCGG TGGCGAGGAC CCGACCGACG GCGGGACCTC GGCCGCCGAG
CAGACGTTCA CGTTCGCGGC GTCGTCGGAC CCGGCCTCGC TCGACCCGGC CTTCGCCAGC
GACGGCGAGA CGTTCCGGGT CGCGCGGCAG ATGTTCGAGG GCCTCGTCGG CACGGTGCCC
GGCACGGCCG ACCCGGCGCC GCTCCTCGCG GAGGAGTGGG AGGTGAGCGA CGACGGCCTC
GAGTACACGT TCTCGCTCCG CGAGGGCGTC ACGTTCCACG ACGACACCCC GTTCAACGCC
GAGGCCGTGT GCTTCAACTT CGAGCGGTGG AACAACTTCG AAGGCATCGC GCAGTCCGAG
AGCCTGTCCT ACTACTGGGG GAAGGTGAAC GGCGGCTTCG CGTCGAGCGA GAACGCCGCG
ATGGACGGCA CGGGCAAGTA CTCCTCGTGC GAAGCACCCG ACGAGCTGAC GGCCGTCATC
ACGCTGTCCT CCCCGCTCCC TGAGCTCGTG TCGGCGCTGT CCCTGCCCGC GTTCTCGATG
CAGTCGCCGA CGGCGCTGCA GGAGTACGGC GCCGACGACG TCACGGGGTC CGCCGAGGCG
CCGGTCCTTC CCACCTACGC CACCGAGCAC CCCACCGGCA CCGGACCGTT CGTGTTCACG
TCGTGGTCGC CGGGCGAGCA GGTCGTCCTG TCCGCGAACC CCGACTACTG GGGCGAGCAG
GGCCAGATCA CCGAGGTCGT GTTCCCGATC ATCTCCGACC CGACAGCGCG CCGACAGGCG
CTCGAGGCAG GGGAGATCGA CGGGTACGAC CTCGTCGGGC CCGCGGACGT CGAGGCGCTC
GCGGCGGACG GGTTCCAGAT CGTCGACCGC GACGCGTTCA ACGTCCTCTA CCTGGGTATG
AACCAGGCGA TCCCCGAGCT GGCGGACATC CGTGTCCGGC AGGCCATCGC GCACGCGGTC
GACAAGGAGG CGCTCGTGGC CGCCACGCTG CCGGAGGGCA CGGAGGTCGC GACGAACTTC
GTGCCGCCGT CCGTGCTCGG CTACAACGAC GAGGTCACGA CGTACGACTA CGACCCGGAC
CTCGCCCGCG ACCTGCTCGC GCAGGCCGGC GTCAGCGACC TGACGATCAA CTTCACGTAC
CCCACGGACG TGTCGCGGCC GTACATGCCG ACGCCGGAGC AGGTGTTCGA GCGCGTCGCG
GCGGATCTCG AGGAGGTCGG CATCACCGTC GAATCCACCC CGCTCCCGTG GTCGCCGGAC
TACCTCGACC GGATCCAGGG CGGCGCCGAC CACGGGCTGC ACCTGCTCGG ATGGACCGGC
GACTACAACG ACACGTACAA CTTCGTCGGC GTCTTCTTCG GCGGACCGTC GAGCGAGTGG
GGCTTCGACA ACCCCGAGCT GTTCGATGCG CTGTCGTCCG CGCGGGTCGC CCCGACGGTC
GAGGAGCAGA CGGCCCTGTA CGAGGACGTG AACGCGCAGA TCATGGAGTT CCTCCCCGGC
GTCCCGATCG CCCACCCGGT GCCCTCGCTG GCGTTCCGGC CGGAGGTGCG GGACTACCCG
GCGTCGCCGG TGCAGGACGA GGTCTACAAC GTCGTGTCGA TCGAGGAGTG A
|
|---|
| Protein sequence | MRQGIKAGVV GAAGLALVLS GCASQRGGED PTDGGTSAAE QTFTFAASSD PASLDPAFAS
DGETFRVARQ MFEGLVGTVP GTADPAPLLA EEWEVSDDGL EYTFSLREGV TFHDDTPFNA
EAVCFNFERW NNFEGIAQSE SLSYYWGKVN GGFASSENAA MDGTGKYSSC EAPDELTAVI
TLSSPLPELV SALSLPAFSM QSPTALQEYG ADDVTGSAEA PVLPTYATEH PTGTGPFVFT
SWSPGEQVVL SANPDYWGEQ GQITEVVFPI ISDPTARRQA LEAGEIDGYD LVGPADVEAL
AADGFQIVDR DAFNVLYLGM NQAIPELADI RVRQAIAHAV DKEALVAATL PEGTEVATNF
VPPSVLGYND EVTTYDYDPD LARDLLAQAG VSDLTINFTY PTDVSRPYMP TPEQVFERVA
ADLEEVGITV ESTPLPWSPD YLDRIQGGAD HGLHLLGWTG DYNDTYNFVG VFFGGPSSEW
GFDNPELFDA LSSARVAPTV EEQTALYEDV NAQIMEFLPG VPIAHPVPSL AFRPEVRDYP
ASPVQDEVYN VVSIEE
|
|---|
| |