| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2151 |
|---|
| Symbol | |
|---|
| ID | 7859512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2421404 |
|---|
| End bp | 2422570 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643866243 |
|---|
| Product | prephenate dehydrogenase |
|---|
| Protein accession | YP_002882165 |
|---|
| Protein GI | 229820639 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.317719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCATCG TGAGTCAGGA GGACGCCGCG CCGGCGAGGA CGACGACGCC GAGCCTGGCG
ACCCGTGGCC CGGTCCTGAT CGTCGGTTCG GGGCTGATCG GCGCGAGCAT CGGCCTGGCC
CTCGCCACGC ACGGCGTCCC GGTGCGGCTG AGCGACGCCT CGCCGTCGGC TCTCGCGCTG
GCGCGCGACG TCGGGGCGGG CCAGCCGTCC GCGGACGCCG ACGACGGCGG CGACGTGCGC
CTCGTGGTGG TGGCCGTGCC GCCGGACGTG ACGGCCGACG TCGTCGCACG CGAGCTGCGC
GCCCATCCGG GTGCCGTGGT GACCGACGTC GCGAGCGTCA AGGGCATCGT GCTGGAGGAG
CTGGCCGACG CGGACCTCGC CGCGGAGGAC CTGGCCCGGT ACGTCGGCTC GCACCCCATG
GCCGGGCGGG AGCGGTCCGG GGCGGCGGCC GCCGACGCCG ACCTGTTCGC CGGACGCCCG
TGGGTGATCG TCGACCACGG GTCGTCGTCG CCGGACGCGC TCATGGCGGT TCGGCACCTC
GCCGTCGACG TCGGCGCGAG CCCCGTGCAG CTGAGCGCAC GCGAGCACGA CGAGGCGGTC
GCGCTCGTCT CGCACCTGCC GCAGGTCATC GCCTCGCTCG TCGCGTCGCG GCTGCAGGGC
GCCCCGGAGT CGGCGCTCGC GCTCGCCGGT CAGGGGCTGC GCGACGTGAC CCGGATCGCG
GCCAGCGACC CGCAGCTCTG GGCGGCGATC CTCGTGGGGA ACGCCGGCCC GGTGGCCGCC
ACGCTGGCGG CGGTCCGCGA CGACCTCGCC GCGTTGGTGT CGGCGCTCGA CGAGGCGGCG
GTGCACGGCC CGCTGACGCC AGGGTCGATG GCCGCGGCGT CCGGCGTCGT CGCGCGCGGG
AACGCCGGCG TGGCTCGGAT CCCGGGCAAG CACGGCGGCG CTCGACGCAC GTACGGCGAG
GTCACGGTGC TCGTGCCGGA CCGCCCGGGC GAGCTCGGCC GCCTGTTCGG CGAGGTCGGC
GAGATCGGCG TGAACATCGA GGACTTCCAG ATGGAGCACG CGCCCCGGCA GAGGGTCGGC
ATGGCGGTGC TGTCGGTGCT GCCGGCGTCC GTCACGCCGC TCGAGGAGGC GCTGCAGGAA
CGGGGTTGGC GGGTGGTGAG CGCATGA
|
|---|
| Protein sequence | MPIVSQEDAA PARTTTPSLA TRGPVLIVGS GLIGASIGLA LATHGVPVRL SDASPSALAL
ARDVGAGQPS ADADDGGDVR LVVVAVPPDV TADVVARELR AHPGAVVTDV ASVKGIVLEE
LADADLAAED LARYVGSHPM AGRERSGAAA ADADLFAGRP WVIVDHGSSS PDALMAVRHL
AVDVGASPVQ LSAREHDEAV ALVSHLPQVI ASLVASRLQG APESALALAG QGLRDVTRIA
ASDPQLWAAI LVGNAGPVAA TLAAVRDDLA ALVSALDEAA VHGPLTPGSM AAASGVVARG
NAGVARIPGK HGGARRTYGE VTVLVPDRPG ELGRLFGEVG EIGVNIEDFQ MEHAPRQRVG
MAVLSVLPAS VTPLEEALQE RGWRVVSA
|
|---|
| |