Gene Bcav_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2134 
Symbol 
ID7859494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2404112 
End bp2405110 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content72% 
IMG OID643866225 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002882148 
Protein GI229820622 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.496312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCA TCGCCATCAA CGGGTTCGGC CGCATCGGAC GCAACGTGCT CCGCGTGATG 
CTCGAACGCG GCACGGACCT CGACGTCGTC GCCGTCAACG ACCTCACGGA GCCGGCCGCC
CTTGCCCGGC TGCTGGCCTT CGACTCGACG TCGGGCCGGC TGGGTCGGCC GGTGACTGTC
GACGGCGACG CTCTCGTCGT CGACGGGCGC CGGATCACCG TGCTCGCCGA GCGGGAGCCG
GCGCAGCTGC CGTGGGCGGA GCTCGGCGTC GACCTCGTGC TCGAGGCGAC TGGCCGCTTC
ACGTCCGCGT CCGCGGCACG TGCTCACCTC GACGCCGGCG CCTCGCGGGT GCTCGTCAGC
GCGCCGTCGG ACGGCGCCGA CGTCACGCTC GCGTTCGGCG TGAACACCGA CGCGTACGAC
CCCGCGGCGC ACACGATCGT CTCGAACGCC TCGTGCACCA CGAACGCGCT CGCGCCGCTG
GCCGCGGTGC TCGACGAGCT CGCCGGCATC GAGCACGGGT TCATGACGAC GGTGCACGCC
TACACGCAGG AGCAGAACCT GCAGGACGGT CCCCATCGGG ACGCGCGCCG CGCTCGCGCC
GCGGCCGTCA ACATCGCGCC GACGACGACC GGTGCGGCGA AGGCGATCGG CCGCGTGCTG
CCGGGTCTCG ACGGCAAGCT CTCCGGCGAC TCGATCCGCG TGCCTGTGCC GGTGGGCTCG
ATCGTCGAGC TCAACACGAC CGTCACGCGC GACGTCTCGC TCGACGACGT GCTGGCCGCG
TACCGCGCTG CCGCCGACGG GCCGCTGCAG GGGATCCTCG AGTACTCCGA CGACGCGCTC
GTGTCTTCGG ACATCACAGG CAACCCGGCG TCGGCGATCT TCGACTCGGA GCTGACCCGC
GTCGAGGGGC GGCACATCAA GGTCGTCGCC TGGTACGACA ACGAGTGGGG CTTCTCGAAC
CGCGTCCTCG ACACGCTCGA GCTGCTCGCC GCCGGGTGA
 
Protein sequence
MTRIAINGFG RIGRNVLRVM LERGTDLDVV AVNDLTEPAA LARLLAFDST SGRLGRPVTV 
DGDALVVDGR RITVLAEREP AQLPWAELGV DLVLEATGRF TSASAARAHL DAGASRVLVS
APSDGADVTL AFGVNTDAYD PAAHTIVSNA SCTTNALAPL AAVLDELAGI EHGFMTTVHA
YTQEQNLQDG PHRDARRARA AAVNIAPTTT GAAKAIGRVL PGLDGKLSGD SIRVPVPVGS
IVELNTTVTR DVSLDDVLAA YRAAADGPLQ GILEYSDDAL VSSDITGNPA SAIFDSELTR
VEGRHIKVVA WYDNEWGFSN RVLDTLELLA AG