Gene Bcav_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2128 
Symbol 
ID7859488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2398597 
End bp2399487 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content70% 
IMG OID643866219 
ProductPhytanoyl-CoA dioxygenase 
Protein accessionYP_002882142 
Protein GI229820616 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC TGATCGAACC GCGGGTCTTC ACCGCGCCGG ACGAGGACGA CCTGAAAGCC 
GCGTACGACA GGGACGGGTT CGTGATCCTC GCCGACGCGA TCGACGCCGA CCTCGTCGCC
GCGCTCAACG ACGACGCGGC GCGCATCTGT CGCGGCGAGC TCGGCGAGGT GGGGGCCGCT
CCGCCCGGCG CCGCAGCTGC CGCGAGCACC GACGAGCTGC TCCGCCAGTT CCTGTGCATC
CACCAGCCGC ACAAGATCTC GGCGGCGGCG CGCACGGCGC TCCACGCACC ACGGGTGGTC
GACGTCGTGA CGACGGTCAT CGGCCCGAAC GTCAAGGCGA TGCAGTCGAT GCTCTTCATC
AAGTCCGAGG GCAAGCCGGG GCAGCCCTGG CACCAGGACG AGTTCTTCAT CCCCACCCGC
GACCGCTCGC TCACGGCCGC GTGGATCGCG CTCGACGACG CGACGATCGA GAACGGGTGC
CTCTGGGTGC TGCCGAGATC CCACCGGGAT GGCGTGCTCT ACCCGGACCG CGAGCAGGAC
GACCCGACGT TCGACTGCTC CATCGAGGCG TACGACTTCC CGTGGACCGA CGAGGACGCG
GTGCCCGTCC AGATCCCGGC GGGCACCGCC GTCGTCTTCA ACGGCTACCT CCTGCACCGG
TCGCTGCAGA ACTCCGGCCG GCGCGGATAT CGCCGGGCGC TCACCAACCA CTACATGAGC
GCCGAGTCGC TCCTGCCGTG GCAGCAGATG CCCGAAGGGG TGCACATCGG CAAGCACGAC
TACCGCGACA TCGTCATGGT GGCCGGACGC GACCCCTACG CGTACAAGGG GGTGGCCGAC
ATCGCGCGAC CGCACTCCCG TCCCGACAAG GACGGCGGGT GCGACCGGTG A
 
Protein sequence
MSTLIEPRVF TAPDEDDLKA AYDRDGFVIL ADAIDADLVA ALNDDAARIC RGELGEVGAA 
PPGAAAAAST DELLRQFLCI HQPHKISAAA RTALHAPRVV DVVTTVIGPN VKAMQSMLFI
KSEGKPGQPW HQDEFFIPTR DRSLTAAWIA LDDATIENGC LWVLPRSHRD GVLYPDREQD
DPTFDCSIEA YDFPWTDEDA VPVQIPAGTA VVFNGYLLHR SLQNSGRRGY RRALTNHYMS
AESLLPWQQM PEGVHIGKHD YRDIVMVAGR DPYAYKGVAD IARPHSRPDK DGGCDR