Gene Bcav_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2117 
Symbol 
ID7859477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2387286 
End bp2388074 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content76% 
IMG OID643866209 
Productbeta-phosphoglucomutase family hydrolase 
Protein accessionYP_002882132 
Protein GI229820606 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CACCCGGCCC GGACGGCCCC ACCGGAGCCC CCGTCGCCCT CGCCGACATC 
GACGCCGTCC TCTTCGACCT CGACGGTGTG ATCACCCCGA CGGCCGAGGT CCACATGCGT
GCCTGGGCGC GCCTGTTCGA GCCGTACCTC GCCGCCCACG GCGCGGCGCC CTACACGGAG
GCCGACTACT TCGCGTCGAT CGACGGCCGA CCCCGCTACG ACGGCGTGCG CACGCTCCTC
GCGTCCCGCG GCATCGAGCT CCCCGACGGC GAGCCGACCG ACCCGCCGGG CGCCGACACG
GTGTGCGGCC TCGGGAACCG GAAGAACCAG GTGTTCCGCG AGGTGCTCGA GGACGAGGGG
GTCACCGCGT ACCCGGGGTC GGTGCGGCTG CTGGACGCAC TGGCCGAGGC CGGGCTCGGC
GTCGCCGTCG TCTCCAGCTC GAAGAACGCG CCGGCCGTGC TGGACGCGGC AGGTCTCGCC
GACCGGTTCG CCGTCGTCGT CGACGGCGCG GTCGCCGTCG CGCGGGGCCT GCCCGGCAAG
CCGGCACCCG ACACGTTCCT GTTCGCCGCG CAGCAGCTCG GCGTCGATCC GGCCAGGGCC
GCCGTCGTCG AGGACGCCAT CTCCGGCGTC GAGGCGGGCC GCGCCGGCGG GTTCGGGTGC
GTCGTCGGGG TGGACCGGGG CGCCGGGCCG GACGCGCTGC GCGACGCCGG TGCCGACGTC
GTGGTGACCG ATCTCGGTGA GCTCGTGGGC GAGGGCGCTC CACGCCGCGC CGCGCGGAGC
GCCCGGTGA
 
Protein sequence
MSTPPGPDGP TGAPVALADI DAVLFDLDGV ITPTAEVHMR AWARLFEPYL AAHGAAPYTE 
ADYFASIDGR PRYDGVRTLL ASRGIELPDG EPTDPPGADT VCGLGNRKNQ VFREVLEDEG
VTAYPGSVRL LDALAEAGLG VAVVSSSKNA PAVLDAAGLA DRFAVVVDGA VAVARGLPGK
PAPDTFLFAA QQLGVDPARA AVVEDAISGV EAGRAGGFGC VVGVDRGAGP DALRDAGADV
VVTDLGELVG EGAPRRAARS AR