| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2113 |
|---|
| Symbol | |
|---|
| ID | 7859473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2382622 |
|---|
| End bp | 2383128 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 643866205 |
|---|
| Product | 2'-5' RNA ligase |
|---|
| Protein accession | YP_002882128 |
|---|
| Protein GI | 229820602 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1514] 2'-5' RNA ligase |
|---|
| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0440288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCTGT TCGTCGCGGT CCCCCTGCCG GGAGCCGTGC GCGCCCAGCT GGCGACCGCT
GTCGAGCCGA TCCGCGGCGG GGACGACGGC GCGCGCTGGG TCTCCCCGCG GCTGTGGCAC
GTGACCGTCG CGTTCCTCGG CGAGGTGCCC GACGCCGACG TGCCGGCCGT GCAGGCGCAC
TGGGCGGAGC GGGCGAGGGA GACCGGCCCG CTCGAGCTGC GTCTCGTGGG CGGCGGGGCG
TTCCCCGACG CGCGGCGGGC GCGCGTCCTG TGGGCAGGGG TCGACGTGGA CCTCCGGGCG
TGGACTGCGC TGGCGGCCGA CGACGCGGTG CCGCACGTGA CGCTCGCTCG GTACCGGCCG
GCGCAGGACG TGCGCCCCGC TGTCGCGGCC CTCGCGGCGG TGCGCACGAG CGCGTGGCGG
TGCCACGGTC TCGCGCTCGT CGAGTCGCGG CCGTCCCCGG ACGCGGAACG CCGCTACGTC
CGCGTGGCGA CGCTTCCGGC ACGCTGA
|
|---|
| Protein sequence | MRLFVAVPLP GAVRAQLATA VEPIRGGDDG ARWVSPRLWH VTVAFLGEVP DADVPAVQAH
WAERARETGP LELRLVGGGA FPDARRARVL WAGVDVDLRA WTALAADDAV PHVTLARYRP
AQDVRPAVAA LAAVRTSAWR CHGLALVESR PSPDAERRYV RVATLPAR
|
|---|
| |