| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2091 |
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| Symbol | |
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| ID | 7859371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 2365547 |
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| End bp | 2366773 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643866183 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002882106 |
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| Protein GI | 229820580 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.319212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.876924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACG CGCGGGAGGC GATCACCCGG GCCCACTCGG AGGAGTGGGC CCGGGTGGTG
GCGTCCCTGA CGCGGCGGTT CGGCGATCTC GACGTCGCCG AGGACGCCGC CGCCGAGGCG
TTCGCGATCG CCGTCGAGCG GTGGCCCGCC GACGGCGTTC CGCCCAAGCC CGGCGCCTGG
CTCACCACGA CCGCGAACCG TCGGGCGATC GACCGGATCC GGCGTGAGAG CAAGCGCGAC
GGCAAGCAGA AGGAGGCCCG GCTGTTGTAC GACGACGACC CGCCCGAGCC CCTCGGCGTG
ATCGACGACG ACCGGCTCCG GCTCATCTTC ACGTGCTGCC ACCCGGCACT CGCGATCGAG
GCCCGGGTGG CCCTGACGCT GCGCATGGTC GGCGGCCTCA CCGTTCCCGA GATCGCGCGC
GCCTTCCTCG TGCAGGAGAG CACCATGGGG CAGCGGATCA CCCGTGCGAA GGCCAAGATC
AAGGCCGCCC GCATCCCGTA CCGGGTGCCG TCCGGGGAGG ACCTCCCGGC CCGGGTCTCC
GGGGTGCTCG CCGTCCTGTT CCTCGTCTTC AACGAGGGCT ACCTGGCGAC GGGCTCCGAC
GTCGACCCCG TGCGTCGCGA CCTCACTGCC GAGGCCATCC GGCTCGCCCG GCTGATCCGG
GAGCTCGTGC CGGAGGACGG CGAGGCGGCC GGCCTGCTGG CACTGATGCT CCTGACCGAG
GCTCGGCGTC CCGCGCGGGT CTCGGCTGGC GGCGAGCTGG TCACCCTCGT CGAGCAGGAC
CGCGGCACCT GGGACGCGGG GCTGATCGCC GAGGGTCACC GGCTGGTGCG CGAGCGCCTG
GCTGCCCGGG TGGCCCCGGG TCGGTACCAG GTCCTCGCGG CGATCAACGC CGTGCACACC
TCCGCCCGCG ACGTCCGGGA CACGGACTGG TCGCAGGTCG TCGCCCTGTA CGACCAGCTC
GTGCGGCTCG ACCCCTCGCC GGTGGTCGCC CTCAACCGGG CCGTCGCCGT GGCGGAGCTC
GACGGGCCGG ACGTGGCCAT GGCCGCCGTC GACAGCCTCG CGGACTCCTT GGACGGCTAC
CACGCGTTCC ACGTGACCCG GGCCGACCTG CTGCGTCGTC TGGGTCGCAG TCGCGAGGCA
CGCGAGGCAT ACGACCGAGC CATCGAGCTG GCGGGCAACA CCGCCGAGAC CGCATACCTC
ACGCGACGCC GCGACCAGCT CGGATAG
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| Protein sequence | MSDAREAITR AHSEEWARVV ASLTRRFGDL DVAEDAAAEA FAIAVERWPA DGVPPKPGAW
LTTTANRRAI DRIRRESKRD GKQKEARLLY DDDPPEPLGV IDDDRLRLIF TCCHPALAIE
ARVALTLRMV GGLTVPEIAR AFLVQESTMG QRITRAKAKI KAARIPYRVP SGEDLPARVS
GVLAVLFLVF NEGYLATGSD VDPVRRDLTA EAIRLARLIR ELVPEDGEAA GLLALMLLTE
ARRPARVSAG GELVTLVEQD RGTWDAGLIA EGHRLVRERL AARVAPGRYQ VLAAINAVHT
SARDVRDTDW SQVVALYDQL VRLDPSPVVA LNRAVAVAEL DGPDVAMAAV DSLADSLDGY
HAFHVTRADL LRRLGRSREA REAYDRAIEL AGNTAETAYL TRRRDQLG
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