Gene Bcav_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2080 
Symbol 
ID7859360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2357838 
End bp2358950 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content69% 
IMG OID643866174 
Productbeta-lactamase 
Protein accessionYP_002882097 
Protein GI229820571 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.16247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.44675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA AGGTACTGAA GCCTCGTTTT GTCGCCGTGG CGACCTCCGG TCTCGTCGGT 
GCTGCCCTGC TCGGCGGCTG CGGCGCGGGC GGTCCCGAGA CCATCGGGTC GTTCCTCGAC
GACACCCTGC CAGCCGGGTC GAGCGGCACG CTCGTGGCGG CCGTCGGCGA CGACCTCGTG
CGCTGCGAGG GCTGGGGCGA GTCCGACCGA GAGCAGGGCG TCGCGGCTGG CTGCGACACC
GTCTATGACA TCATGTCGAT GACGAAGCAG TTCACGGCCG CCGCGGTACT GACCCTCCAG
GAACAGGGTG CCCTCGCCGT GACCGATCCG ATCTCACGCC ACCTCGACGA CATCCCCGCC
GACAAGCGCG CCGTCACCGT CGAGCAACTA CTCACCCACA CCGCGGGCTT CGTCGACTCA
CTGGGCGAGG ACGACGAGCC GCTCACGAAG CCGGAGTTCC TCCACCGCGC GCTCACGTCC
GAACTGCAGT CGGCGCCGGG CTCGACGTAC CTCTACTCCA ACGTCGGGTA CAGCCTGTTA
GCAGCCATCA TCGAGTCGGC ATCTGGAACG TCGTACGAGC GGTACATGGC GGACCAGCTC
TTCGGTCCGG CCGGCATGGA CCGCACCGGT TACGTCCTGC CGACGTGGGA CCCGGCCGAT
CTGGCTGTCG AGTACGACGC CGCGGGCGTC GCACAAGGGA CACCGCAGGA GCATCCGTGG
GCCGACGACG GCCCGTACTG GAACCTCCGG GGTAACGGCG GGCTGCTGTC CACCGCCCGC
GACATCTACC GGTGGCACCG GGCGCTCGTG GGAGATCGGG TCCTCGACGA AGCCGCGAAA
GAGCAGCTGT TCGAGCCCCG GGTCCGCGAG GAGCCCGACG GCGACACCTT CTACGGCTAC
GGCTGGGTGC TGCACAAGTC CGGCGACGGT GTCATCGCCT GGCACAACGG CGCCAACGAC
TGGGCGTACG GCGAGATCGA GCGCGCCTCC CAGGAGCGCA CGCTGGTCTT CTGGATCACC
AACCAGGCGC GCAGCGACGA GGGCTGGGAC TTCGAGGACC TCGGCCCGGA CATCACGGAC
GGGATCACCG ACCGGCTGCT CGCGGGCAGC TAG
 
Protein sequence
MTGKVLKPRF VAVATSGLVG AALLGGCGAG GPETIGSFLD DTLPAGSSGT LVAAVGDDLV 
RCEGWGESDR EQGVAAGCDT VYDIMSMTKQ FTAAAVLTLQ EQGALAVTDP ISRHLDDIPA
DKRAVTVEQL LTHTAGFVDS LGEDDEPLTK PEFLHRALTS ELQSAPGSTY LYSNVGYSLL
AAIIESASGT SYERYMADQL FGPAGMDRTG YVLPTWDPAD LAVEYDAAGV AQGTPQEHPW
ADDGPYWNLR GNGGLLSTAR DIYRWHRALV GDRVLDEAAK EQLFEPRVRE EPDGDTFYGY
GWVLHKSGDG VIAWHNGAND WAYGEIERAS QERTLVFWIT NQARSDEGWD FEDLGPDITD
GITDRLLAGS