Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2080 |
Symbol | |
ID | 7859360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2357838 |
End bp | 2358950 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643866174 |
Product | beta-lactamase |
Protein accession | YP_002882097 |
Protein GI | 229820571 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.16247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.44675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCA AGGTACTGAA GCCTCGTTTT GTCGCCGTGG CGACCTCCGG TCTCGTCGGT GCTGCCCTGC TCGGCGGCTG CGGCGCGGGC GGTCCCGAGA CCATCGGGTC GTTCCTCGAC GACACCCTGC CAGCCGGGTC GAGCGGCACG CTCGTGGCGG CCGTCGGCGA CGACCTCGTG CGCTGCGAGG GCTGGGGCGA GTCCGACCGA GAGCAGGGCG TCGCGGCTGG CTGCGACACC GTCTATGACA TCATGTCGAT GACGAAGCAG TTCACGGCCG CCGCGGTACT GACCCTCCAG GAACAGGGTG CCCTCGCCGT GACCGATCCG ATCTCACGCC ACCTCGACGA CATCCCCGCC GACAAGCGCG CCGTCACCGT CGAGCAACTA CTCACCCACA CCGCGGGCTT CGTCGACTCA CTGGGCGAGG ACGACGAGCC GCTCACGAAG CCGGAGTTCC TCCACCGCGC GCTCACGTCC GAACTGCAGT CGGCGCCGGG CTCGACGTAC CTCTACTCCA ACGTCGGGTA CAGCCTGTTA GCAGCCATCA TCGAGTCGGC ATCTGGAACG TCGTACGAGC GGTACATGGC GGACCAGCTC TTCGGTCCGG CCGGCATGGA CCGCACCGGT TACGTCCTGC CGACGTGGGA CCCGGCCGAT CTGGCTGTCG AGTACGACGC CGCGGGCGTC GCACAAGGGA CACCGCAGGA GCATCCGTGG GCCGACGACG GCCCGTACTG GAACCTCCGG GGTAACGGCG GGCTGCTGTC CACCGCCCGC GACATCTACC GGTGGCACCG GGCGCTCGTG GGAGATCGGG TCCTCGACGA AGCCGCGAAA GAGCAGCTGT TCGAGCCCCG GGTCCGCGAG GAGCCCGACG GCGACACCTT CTACGGCTAC GGCTGGGTGC TGCACAAGTC CGGCGACGGT GTCATCGCCT GGCACAACGG CGCCAACGAC TGGGCGTACG GCGAGATCGA GCGCGCCTCC CAGGAGCGCA CGCTGGTCTT CTGGATCACC AACCAGGCGC GCAGCGACGA GGGCTGGGAC TTCGAGGACC TCGGCCCGGA CATCACGGAC GGGATCACCG ACCGGCTGCT CGCGGGCAGC TAG
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Protein sequence | MTGKVLKPRF VAVATSGLVG AALLGGCGAG GPETIGSFLD DTLPAGSSGT LVAAVGDDLV RCEGWGESDR EQGVAAGCDT VYDIMSMTKQ FTAAAVLTLQ EQGALAVTDP ISRHLDDIPA DKRAVTVEQL LTHTAGFVDS LGEDDEPLTK PEFLHRALTS ELQSAPGSTY LYSNVGYSLL AAIIESASGT SYERYMADQL FGPAGMDRTG YVLPTWDPAD LAVEYDAAGV AQGTPQEHPW ADDGPYWNLR GNGGLLSTAR DIYRWHRALV GDRVLDEAAK EQLFEPRVRE EPDGDTFYGY GWVLHKSGDG VIAWHNGAND WAYGEIERAS QERTLVFWIT NQARSDEGWD FEDLGPDITD GITDRLLAGS
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