| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2061 |
|---|
| Symbol | |
|---|
| ID | 7859341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2340233 |
|---|
| End bp | 2341021 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643866155 |
|---|
| Product | Sec-independent protein translocase, TatC subunit |
|---|
| Protein accession | YP_002882078 |
|---|
| Protein GI | 229820552 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.117504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.17357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGG GTGCGCACCT GCGTGAGCTC CGGCGCCGGT TTCTGCTCAT CACAGCCGGC
CTCGCGGTCG GGATGGTCGT CGGCTGGGTC CTCTACCCGT ACGTCTTCGA CGCCATCCAG
GCGCCGATCG TCGCGCAGGC GGAGGCAGGA CTCGACGCCC AGCTGAACTT CGTCGGGGTC
GCCTCCGCGA TCGACATCAA GATCAAGGTC TCGCTCTTCG TCGGCCTCGT CGTGTCGAGC
CCGTGGTGGC TGTACCAGGT CTGGGCGTTC ATCATGCCCG GGCTCCGCTC GAAGGAGAAG
CGCTACGCGT TCGGGTTCGT CGGCGCAGCG GTCCCGCTGT TCCTCGGCGG CACGTTCCTC
GCCTGGAGCG TCCTGCCGAA CGCCGTCCGC CTGCTGACGG AGTTCACGCC CGAGGGCGCG
GCGAACCTCA TCGACGCGTC GACGTACATC ACGTTCGTCA TGCAGTTCAT GATCGCGTTC
GGCCTTGCGT TCATCATGCC CCTGCTCATG GTTCTGCTGA CGTTCATCGG GATCGTGCGA
GGTCAGACGT GGGCCAAGGG CTGGCGCTGG GCTGTGGTGG GCATCTTCGC CTTCGCCGCC
GTCGCCACGC CGACGCCTGA CGCGATCTCC ATGATCCTGC TGGCGCTGCC GATCTGTGGG
CTCTACGGCA TCGCACTCAC CGTCTGCCTC CTGCACGACC GTCGTCGAGA CCGCAGGCTG
GCCGAGGAGG ACGAGCTGGC GGAGGCGCCG GCCTCGGACG AGGGAGCGGC CGGGGCCGCA
GAGGCGTGA
|
|---|
| Protein sequence | MALGAHLREL RRRFLLITAG LAVGMVVGWV LYPYVFDAIQ APIVAQAEAG LDAQLNFVGV
ASAIDIKIKV SLFVGLVVSS PWWLYQVWAF IMPGLRSKEK RYAFGFVGAA VPLFLGGTFL
AWSVLPNAVR LLTEFTPEGA ANLIDASTYI TFVMQFMIAF GLAFIMPLLM VLLTFIGIVR
GQTWAKGWRW AVVGIFAFAA VATPTPDAIS MILLALPICG LYGIALTVCL LHDRRRDRRL
AEEDELAEAP ASDEGAAGAA EA
|
|---|
| |