| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2057 |
|---|
| Symbol | |
|---|
| ID | 7859337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2337458 |
|---|
| End bp | 2338420 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866151 |
|---|
| Product | transcriptional regulator-like protein |
|---|
| Protein accession | YP_002882074 |
|---|
| Protein GI | 229820548 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.090135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.188447 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCC GGGTCGACCC AGCCGAGCGT CTGCTCGACC TCGTCATCGC GCTCGCCCAC
ACCACGCACC GCATGACGAA GTCGCAGATC CGGCGCGTCG TGCACGGGTA CGGCGAGGCC
GCGTCCGACG AGGCGTTCGA GCGCATGTTC GACAGGGACA AGAGCGCACT GCGCGATCTC
GGGATCCCGC TCGTCACGCA GACGGACGAC GCGCACGCGG ACGACGTCGG CTACCGCATC
GACCTCGCCG GGTACGAGCT TCCGCCGCTG GACCTGACGC CGGCCGAGAT CGGCCTGCTC
TCGCTCGCGA CGCAGGTCTG GCAGGACGCC CAGTTCGCCG CCGTCGCCCA GCGCGGGCTC
ACGAAGCTGC GCGCCGTGGC GCCGACCGCC GCGACGGACC TGACCGGCCT CGCTCTGCGC
GTACGGCCGC CCGAGACGGC GTTCTCGCCC CTCCTGGAGG CGATCGAGCA GCGGTCCGCC
GTGACGTTCC CGTACCGTGC GGCCGGCACG GGCCGGGAGG AGCGGCGCGA GGTCGAGCCG
TGGCGCCTCG TGGCCCAGGA CCACGCCTGG TACCTCCGTG CGTTCGACCG TGGCCGCGGC
GCGGAGCGGA TGTTCCGCCT CTCCCGCATC ACCGGACCCG TGCGGCGCAG CGGGCGGGCC
GGCGTCGTCG AGATCCCCGC GGGCCTGGGT GAGTCGGCGC CCGCGCGTCG GGCGGCGGGG
ACGGCGCGGC TCGCGCTGCG GCCCGAGCGA GCCGCCGCGC TGCGAGCCCG CGCCATCGGG
CCGGTCGTCG CCGGCGGCGA CCGCGACGTC GTCGAGATCC CCATGCCTGA CGCCGAGGAG
CTGGCCCAGG AGATCGCCGC GTTCACCGAC GCCGTCGTGG TCCTCGAGCC GCTCGAGCTG
CGCGACGCCG TCCTGCACCG GCTCGCCTCC GCCGCCGCGC TGGGGGAGGG TCACGATGGC
TGA
|
|---|
| Protein sequence | MATRVDPAER LLDLVIALAH TTHRMTKSQI RRVVHGYGEA ASDEAFERMF DRDKSALRDL
GIPLVTQTDD AHADDVGYRI DLAGYELPPL DLTPAEIGLL SLATQVWQDA QFAAVAQRGL
TKLRAVAPTA ATDLTGLALR VRPPETAFSP LLEAIEQRSA VTFPYRAAGT GREERREVEP
WRLVAQDHAW YLRAFDRGRG AERMFRLSRI TGPVRRSGRA GVVEIPAGLG ESAPARRAAG
TARLALRPER AAALRARAIG PVVAGGDRDV VEIPMPDAEE LAQEIAAFTD AVVVLEPLEL
RDAVLHRLAS AAALGEGHDG
|
|---|
| |