Gene Bcav_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2032 
Symbol 
ID7858652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2312297 
End bp2312758 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content74% 
IMG OID643866126 
ProductNusB antitermination factor 
Protein accessionYP_002882049 
Protein GI229820523 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0272583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCTC GCAGGAAGGC GCGCAAACGG GCGCTCGACC TCCTCTACGA GGCCGACCAG 
AAGGCGGTGT CCGGCGGCGC TCCCGCCAGC GGTGACGCCG TCGCCCTGCT CGCCGAGCGG
ATCGCGACGC CGCACGGCGA GGCGCCCATG CGGGAGTACA CGGTCGAGAT CGTCGAGGGC
GTCGCGGCGC ACCAGGCACG GATCGACGAG CTCCTCGAGA CGTACGCCCA GGGGTGGAGC
CTCGAGCGGA TGCCGGCGGT CGACCGCGCG ATCCTGCGCA TCGGGGTGTG GGAGCTGCTG
TTCAACGACG ACGTGCCCGA CGCCGTCGCC GTCGACGAAG CGGTGGCCCT CGCTGCCGAG
CTCTCGACCG ACGACTCGCC GACGTTCGTC AACGGCCTCC TCGGGCAGCT GCTGCGGCTC
GCGCCGGTGC TGCGGGACGA GGAGGCCGCC GCGGGCGGCT AG
 
Protein sequence
MAARRKARKR ALDLLYEADQ KAVSGGAPAS GDAVALLAER IATPHGEAPM REYTVEIVEG 
VAAHQARIDE LLETYAQGWS LERMPAVDRA ILRIGVWELL FNDDVPDAVA VDEAVALAAE
LSTDDSPTFV NGLLGQLLRL APVLRDEEAA AGG