| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2031 |
|---|
| Symbol | |
|---|
| ID | 7858651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2311733 |
|---|
| End bp | 2312293 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643866125 |
|---|
| Product | translation elongation factor P |
|---|
| Protein accession | YP_002882048 |
|---|
| Protein GI | 229820522 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0283739 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCTCCA CCAACGACCT CAAGAACGGC CTCGTGCTCG ACCTCGACGG CCAGCTCTGG
ACAGTAGTCG AGTTCCAGCA CGTCAAGCCC GGCAAGGGCC CGGCGTTCGT CCGCACCAAG
CTCAAGCACG TGCTGTCCGG GAAGACCGTC GACAAGACGT TCAACGCGGG TATCAAGGTG
GACACCGCGA CGGTCGACAA GCGCGACATG CAGTACCTGT ACAAGGACGG CGACGACTTC
GTCTTCATGG ACAGCTCGGA CTACGAGCAG TTCCACGTCG GCCCCCAGAT CGTGGGCGAC
GCGGCGAACT TCATGCTCGA GAACACCGAG GTCATCGTCG CGCTGCACGA GGGCAACCCG
CTCTACGTGG AGCTCCCGAC GTCCGTCGTG CTCGAGATCA CCTACACCGA GCCCGGGCTG
CAGGGCGACC GCTCCTCCGC GGGCACGAAG GCGGCGACCG TCGAGACGGG CTACCAGATC
CAGGTCCCGC TCTTCCTCGA GATCGGCACC AAGGTCAAGG TCGACACGCG CTCGGGTGAC
TACCTCGGCC GCGTGAACTG A
|
|---|
| Protein sequence | MASTNDLKNG LVLDLDGQLW TVVEFQHVKP GKGPAFVRTK LKHVLSGKTV DKTFNAGIKV
DTATVDKRDM QYLYKDGDDF VFMDSSDYEQ FHVGPQIVGD AANFMLENTE VIVALHEGNP
LYVELPTSVV LEITYTEPGL QGDRSSAGTK AATVETGYQI QVPLFLEIGT KVKVDTRSGD
YLGRVN
|
|---|
| |