Gene Bcav_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2028 
Symbol 
ID7858648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2309563 
End bp2310414 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content73% 
IMG OID643866122 
Productbeta-lactamase 
Protein accessionYP_002882045 
Protein GI229820519 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0557352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACCT ACCCCACCCT GGACTCCTTC GACTTCCCGG TCGCGCTGGC CGTGGCCGAC 
CGGACGCACG TCCTCTCGAC CGATGGTGAC GTCGAGGCCG TGCTGCCGTG GAAGTCCGTC
ACGAAGCCGC TGACCGCGCT CGCCGCGCTC GCCGCGATCG ACACCGGCGC CCTCGGCCTG
GACGACCCCG CCGGTCCGGA CGGGTCCACC GTGCGCCACC TGCTGGCCCA CGCGTCCGGG
CTCCCGTTCG AGGCCGGCGG AGTGACCCAG CAGCCGGGGC GTCGCCGCGT CTACTCCAAC
CTCGGCTTCG AGGTGCTCGG AGACGTCGTG GCGGCGGCGG TCGGCACGGA CGTCGGCTCC
TGGGTCCGGC GTGCGGTGAT CGAGCCGCTG GAGCTCGACT CCACCACGCT CGACGGCAGC
CCGGCCCACG CGGCGTCGGG CTCCACGCTC GACGTCCTCG CCCTCGGGCT CGAGCTGGCA
CACCCGCACC TCATCTCCGC GGAGCTCGCG CACGAGGCCA GCACGGTGCA GCTCCCCGGT
CTCGCCGGCG TCCTGCCCGG CTTCGGCAAG CAGGACCACA ACGACTGGGG CCTCGGCTAC
GAGATCCGGG ACCACAAGTC GCCGCACTGG ACGGGTTCCC AGTCCTCCCC CGCCACGTAC
GGGCACTTCG GCCAGTCCGG GAGCTTCCTC TGGGTGGATC CCGACGCCGG GCTGGTTGCC
GCGTTCCTCG GCGAGCGGTC GTTCCGAGCG GAGGTCCACG GCCGGCTCTG GCCCGCCCTG
ACGGACGAGA TCCTCACCGC GCACGGCGGT GTGTCGTTCT CGTCCAAGAC GCCGGCCCCT
GACGCCCCCT AG
 
Protein sequence
MATYPTLDSF DFPVALAVAD RTHVLSTDGD VEAVLPWKSV TKPLTALAAL AAIDTGALGL 
DDPAGPDGST VRHLLAHASG LPFEAGGVTQ QPGRRRVYSN LGFEVLGDVV AAAVGTDVGS
WVRRAVIEPL ELDSTTLDGS PAHAASGSTL DVLALGLELA HPHLISAELA HEASTVQLPG
LAGVLPGFGK QDHNDWGLGY EIRDHKSPHW TGSQSSPATY GHFGQSGSFL WVDPDAGLVA
AFLGERSFRA EVHGRLWPAL TDEILTAHGG VSFSSKTPAP DAP