Gene Bcav_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2022 
Symbol 
ID7858642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2304997 
End bp2305671 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content78% 
IMG OID643866116 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_002882039 
Protein GI229820513 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0298197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCG ACGCGGAATT GGCGGAGCCC GCACGGCTCA TGGGAGAGCC GGCGCGGGCG 
GCGATGCTGA CGGCTCTGTC CGGCGGGCGG GCGCTGCCGG CGTCGGACCT GGCGCGCGCC
GCACGCGTGA CACCGGCGAC GGCGAGCTCG CACCTGGCCC GGCTGCTCGC GGGCGGCCTC
GTCGTCGCGC ACCGCCAGGG TCGGCACCGG TACTTCGCGC TCGCCTCCCC CGACGTCGCC
CGCGCGGTCG AGGCGCTGCA GGCGATAGCG CCGCGGCGCC CGATCGGCTC CTACCGCGAG
TCTCGCGCCG CGGCACGGCT CGCGGAGGCC CGCAGCTGCT ACGACCACCT CGCCGGCCGC
CTCGCGCTCG ACATCGCTGA CGCGCTCGTC GCGGAGGGGT CGCTGGCACC GCTCGTGGCG
GGCGGCGTCG GGACGCTCCA CGGCGTCCGG GGACCTGTGG CAGCCCGTCT GCGGCTCGGC
GACGCGGAGC CCGGCTCCCG GCGTTCGCTG GTGCGCGGCT GCCTCGACTG GACCGAACGC
CGCCCTCACC TGGCGGGGGC GCTGGGCGCG CACGTGCTCG AGCTGCTGCT CACCGAGGGG
GCGGTGACCC GGGTCGACGG CGACCGGTCG CTTCGCGTCG ACGCGACGCG CCTCGCCTGG
CTGGACGCGG CGTGA
 
Protein sequence
MDGDAELAEP ARLMGEPARA AMLTALSGGR ALPASDLARA ARVTPATASS HLARLLAGGL 
VVAHRQGRHR YFALASPDVA RAVEALQAIA PRRPIGSYRE SRAAARLAEA RSCYDHLAGR
LALDIADALV AEGSLAPLVA GGVGTLHGVR GPVAARLRLG DAEPGSRRSL VRGCLDWTER
RPHLAGALGA HVLELLLTEG AVTRVDGDRS LRVDATRLAW LDAA