Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2020 |
Symbol | aroK |
ID | 7858640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2303362 |
End bp | 2303883 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643866114 |
Product | shikimate kinase |
Protein accession | YP_002882037 |
Protein GI | 229820511 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0278183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCGGC CGCGCGTCGT GCTCGTCGGC CCGCCCGGAT CCGGCAAGAC GACCGTGAGC GCCCTGCTCG CGGCCGCGCT CGGCGTCGAC GTGCGGGACA CCGACGCGGA CGTCGAGGCC ACGGCTGGGC GGCCGATCAC GGAGATCTTC GTGGACGACG GCGAGGACGC GTTCCGCGAT CTCGAGCGCG CCGCGGTCGC GGCCGCGCTG GCCGAGCACG ACGGGGTCCT GGCGCTCGGC GGGGGAGCGG TCCTGGACGC CGGGACCCGC GCGAAGCTCG CCGAGCACAC GGTGGTGTAC CTCGAGGTGT CGCTCACGAG CGCGGCGCCG CGGGTCGGTC TCGACCGGTC CCGGCCCCTG CTGCTCGGCA ACCCGCGCGC GCAGTGGAAG AAGCTGATGG ACGCACGCCG TCCCCTGTAC GAGGAGGTCG CCGCGATCAG CGTGAGCACC GACTCCAAGT CCCCGGACGA CGTCGCCGCG GAGATCCTCG CCGCGCTCGG CCGGGCGGAG GCGGCACGAT GA
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Protein sequence | MTRPRVVLVG PPGSGKTTVS ALLAAALGVD VRDTDADVEA TAGRPITEIF VDDGEDAFRD LERAAVAAAL AEHDGVLALG GGAVLDAGTR AKLAEHTVVY LEVSLTSAAP RVGLDRSRPL LLGNPRAQWK KLMDARRPLY EEVAAISVST DSKSPDDVAA EILAALGRAE AAR
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