Gene Bcav_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2010 
Symbol 
ID7858630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2293017 
End bp2294471 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content76% 
IMG OID643866104 
ProductAAA ATPase central domain protein 
Protein accessionYP_002882027 
Protein GI229820501 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.105628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.523628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCTGT TCGAGGCGGC TGCGAGCGAC CCGGCCGGCG TCCCGGCCGC CCGGCCCGAT 
GCGCCGCTGG CCGTGCGCAT GCGCCCGGCC TCGGCGTCCG AGGTGGTCGG GCAGGAGCAC
CTCCTCGAGC CCGGAGCGCC GCTGCGGCGC CTCACGGAAC CGGCCGACCC GGGCGCGCCG
CCGCCGTCGT CGGTGATCCT CTGGGGACCA CCGGGCACGG GCAAGACGAC GCTCGCGTAC
CTCATCGCCC ACGCTTCAGG TCGCCGGTTC GTGGAGCTGT CCGCCGTCAC GGCCGGCGTG
CGCGACGTCC GCGCGGTCAT CGACGACGCA CGCCGGCGCC TCGCGGGCGG CGGCGTCGAG
ACGGTGCTCT TCGTCGACGA GGTGCACCGG TTCTCGAAGA CGCAGCAGGA CGCGCTGCTG
CCGAGCGTCG AGAACCGGTG GGTCACGCTC GTCGCGGCGA CCACGGAGAA CCCGAGCTTC
TCCGTGATCT CCCCGTTGCT CTCCCGCTCC CTGCTGCTGA CGCTGCGGCC GCTGACCGAG
GCCGACGTCG CGCGGCTGGT CGACCGGGCC CTCGACGACG AGCGGGGCCT GGCCGGCCGC
TACACGCTCG ACGACGACGC GCGTGCGCAC CTGCTCCGGC TCGCGGGCGG CGACGCACGC
AAGGCGCTGA CGATCCTCGA GGCGGCGGCC GGCACCGCGG CCCTGCCCGG CGCGGGCGAC
GACGCGCGGG GGATCGACCT GGAGGCGGTC GAGCGGGCGG TCGACGTCGC GGCGGTGCGG
TACGACCGTG ACGGCGACCA GCACTATGAC GTCACGAGCG CGTTCATCAA GTCCATGCGC
GGGTCGGACG TCGACGCCGC CCTGCACTAC CTCGCGCGCA TGGTGGCGGC GGGGGAGGAC
CCGCGGTTCA TCGCCCGGCG CATCGTCATC GCGGCCAGCG AGGAGGTCGG GATGGCCGAC
CCCACGGCTC TCGCGACGGC TGTGGCGGCG TTCCAGGCGG TCTCGTTCAT CGGGCTGCCC
GAGGCGAGGA TCGTGCTGGC CCAGGCCGTG GTGCACGTCG CCACCGCCCC GAAGTCGAAC
GCGGCGTACA AGGCGATCGA CGAGGCGCTG GCCGACGTCC GGGCCGGGCG GGGCGGGTCG
GTCCCGGTGC ACCTGCGCGA CACGCACTAC GCCGGCGCCG AGCGCCTCGG CCACGGCGAG
GGGTACGCGT ACGCGCACGA CGCGCCGCAC GGCGTCGCGG CCCAGCGGTA CGCTCCCGAC
GGGCTGGAGA GCGCCCGGTA CTACCACCCG ACGGCGCGCG GCCTCGAGGG GCAGATCGGG
CCGCGGCTGG AGCGGATCCG GGAGATCCTC GGCGGCGCGG GGCGGGCGTC CGCCCCGTCT
GACGCCGAGC GTGCCGCACC TCCTGCGCCT CCCGCCCCGG AGAGAGCCGA TCGGCCCGAC
GCGCCGGGCG TGTAG
 
Protein sequence
MDLFEAAASD PAGVPAARPD APLAVRMRPA SASEVVGQEH LLEPGAPLRR LTEPADPGAP 
PPSSVILWGP PGTGKTTLAY LIAHASGRRF VELSAVTAGV RDVRAVIDDA RRRLAGGGVE
TVLFVDEVHR FSKTQQDALL PSVENRWVTL VAATTENPSF SVISPLLSRS LLLTLRPLTE
ADVARLVDRA LDDERGLAGR YTLDDDARAH LLRLAGGDAR KALTILEAAA GTAALPGAGD
DARGIDLEAV ERAVDVAAVR YDRDGDQHYD VTSAFIKSMR GSDVDAALHY LARMVAAGED
PRFIARRIVI AASEEVGMAD PTALATAVAA FQAVSFIGLP EARIVLAQAV VHVATAPKSN
AAYKAIDEAL ADVRAGRGGS VPVHLRDTHY AGAERLGHGE GYAYAHDAPH GVAAQRYAPD
GLESARYYHP TARGLEGQIG PRLERIREIL GGAGRASAPS DAERAAPPAP PAPERADRPD
APGV