Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2005 |
Symbol | |
ID | 7858625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2284774 |
End bp | 2286543 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643866099 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002882022 |
Protein GI | 229820496 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.343146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATG TTGCCCTGAC CTCCCCTGCC ACCCAGCCCG TCGGCGCCGG CTCCGAGCCG TCGTTCGACG ACCTGGGCCT GCCGCAGGCC CTCCTCGACG CCGTCACCGG CCTCGGCTTC ACGACCCCCA CCCCCATCCA GACGGCGGCG ATCCCGGCGC TGCTCTCCGG CCGGGACCTC GTCGGCGTCG CCCAGACGGG CACCGGCAAG ACCGCCGCGT TCGGTCTGCC GCTCCTCGCC GCCGTCGACC CGCAGCTGGC CGCCGTGCAG GCCCTCGTGC TCACGCCGAC GCGCGAGCTC GCGATCCAGG TGAGCGACGC GGTGGCGTCG TTCGTGCCGT CCGGTGCCGG CGTGAAGGTG CTGCCGATCT ACGGCGGCGC GAGCTTCGTG CCGCAGCTGC GCGGCCTCGA GCGGGGAGCG CAGGTCGTCG TCGGGACTCC CGGTCGCGTG ATCGACCTCC TCGAGCGGGG TTCGCTCGAC CTCGACGCGC TGCGCTACCT CGTGCTCGAC GAGGCCGACG AGATGCTCCG GATGGGCTTC GCCGAGGACG TCGACGTCAT CCTGGCGAAG ACGCCCGCCA CGAAGCAGGT CGCGCTGTTC TCCGCGACCA TGCCGCCGCC GATCCGCAAG GTCGCCGAGA CGCACCTGCG CAACCCGGAG GAGATCGCCG TCGCCCGCCA GGCCACGCCG ATCGCCGCGG TGACGCAGAC GTACGCCATC GTGCCGTACC GGAACAAGGC CGAGGCGCTG TCGCGGGTCC TCGCGACGAG CGACGCCGAC GCCGCGATCG TGTTCGTCCG TACGCGTGAG ACCGCGGAGG AGGTCGGCAC CGCCCTCGCG TCGCGCGGGA TCAACGCCGC GTCGATCAGC GGCGACGTCG CTCAGCGTGA ACGTGAGCGG ATCGTCGAGC GGCTCCGCTC GGGTGCGCTC GACGTGCTCG TGGCGACCGA CGTCGCGGCC CGTGGTCTCG ACGTCGAGCG CATCGGGCTC GTCGTCAACT TCGACGTGCC GCGCGAGGTC GAGACGTACG TGCACCGGAT CGGGCGGACC GGCCGCGCTG GGCGTACCGG GAACGCCCTG ACGTTCCTCA CGCCGAAGGA GAAGCCGCGC CTGCGCACGA TCGAGCGCGT CACGGGTTCC CGCCTCGTCG AGGCCACCAT CCCGACGAAC GCCGAGGTCG CCGCGCACCG GACCGGTGCG GCGCTGGCGA CGGCGCACGC GCGCCTCGGG GCGGGCGACG TGTCCGCGCA CCGGGAGCGT CTCGTCGCCC ACGTCGCGGA GCTCGGCGTG GACCCGCTCG ACGTCGCTGC TGCGCTCCTC GCGCTCGCTG TCGGCGACGA CGGCGCTCCC GCCGGCGATG ACCTCGCCCT TCCCGCGCAC GACGGCGACC GGCAGCGCGG GTTCGACGGT GACCGGGGTC GCGAGCGCGG CGGACGACGT GGGGGCGGAG ACGGCGAGAA GTACCGGATC GCCGTCGGCC ACCGGGACGG CGTCAGCCCG CAGGCGATCG TCGGCGCGAT CACCGGTGAG GGCGGCCTCC GCGGCGCCGA CATCGGCAAG ATCGACATCT TCCCGAGCTT CTCCCTCGTG GAGATCCCGG GCGGGGTCTC CCCCGACGTG GCGCGCCGGA TCGGTGCCGC CAAGGTCGCG GGGCGCCCGC TGCGGATCCG GCTCGACGAC GGCCCGCCGA ACCGCGGCCA CCGCTCGGGC GGCGGCCAGC GTGACGCGCG GGGTCCGCGC GACTCGCGCC GGCCCTCGCG CGCGTACTGA
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Protein sequence | MSDVALTSPA TQPVGAGSEP SFDDLGLPQA LLDAVTGLGF TTPTPIQTAA IPALLSGRDL VGVAQTGTGK TAAFGLPLLA AVDPQLAAVQ ALVLTPTREL AIQVSDAVAS FVPSGAGVKV LPIYGGASFV PQLRGLERGA QVVVGTPGRV IDLLERGSLD LDALRYLVLD EADEMLRMGF AEDVDVILAK TPATKQVALF SATMPPPIRK VAETHLRNPE EIAVARQATP IAAVTQTYAI VPYRNKAEAL SRVLATSDAD AAIVFVRTRE TAEEVGTALA SRGINAASIS GDVAQRERER IVERLRSGAL DVLVATDVAA RGLDVERIGL VVNFDVPREV ETYVHRIGRT GRAGRTGNAL TFLTPKEKPR LRTIERVTGS RLVEATIPTN AEVAAHRTGA ALATAHARLG AGDVSAHRER LVAHVAELGV DPLDVAAALL ALAVGDDGAP AGDDLALPAH DGDRQRGFDG DRGRERGGRR GGGDGEKYRI AVGHRDGVSP QAIVGAITGE GGLRGADIGK IDIFPSFSLV EIPGGVSPDV ARRIGAAKVA GRPLRIRLDD GPPNRGHRSG GGQRDARGPR DSRRPSRAY
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