| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2004 |
|---|
| Symbol | |
|---|
| ID | 7858624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2283642 |
|---|
| End bp | 2284748 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866098 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002882021 |
|---|
| Protein GI | 229820495 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1533] DNA repair photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.121365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.180359 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATGGG ACACGCAGGA GCTCGACGGC GCGGCCGGGG CCGGTGAGCT ACCCGGGCTG
GGGCTACGCG GGCTCGTCCG CTCCGTGACG ACACCGGAGT TCGCGGGAGT CACGTTCCAC
GAGGTCGCCG CGAAGAGCCT CCTGAACCGG GTGCCGAGCG GTTCGGCGAT GCCGTACGGC
TGGACGATCA ACCCGTACCG CGGGTGCACC CACGCCTGCA CGTACTGCTT CGCGCGCCCG
ACGCACACGT ACCTCGACCT CGACGCGGGC GAGGACTTCG ACCGGCAGAT CGTCGTGAAG
GTCAACGCGG CGGACGTCCT CCACGCGGAG CTGCGCCGCC CGGGCTGGAA CCGCGAGCAC
GTGGCGATGG GCACGAACAC CGACCCGTAC CAGCGCGCCG AGGGCCGGTA CCGGCTGATG
CCGGGGATCG TGGCGGAGCT CGCGCGGTCC GGCACGCCGT TCTCGATCCT CACGAAGGGC
ACGCTGCTGC GGCGCGACCT TCCGCTGCTC ACGGCGGCAC GCAAGGACGT CGCCGTCGGG
CTCGGCGTCT CCCTCACCCT CCTGGATGCC GGGCTCCAGG CCTCGCTGGA GCCGGGGACT
CCGTCGCCGG CAGCACGGCT CGGCCTCGTG CGCGCCGCGC GGGACGCCGG CCTCGACTGC
GGGGTGTTCG TGGCGCCGGT CCTGCCCTGG CTCACGGACT CCGCGGACCA CCTCGACGCG
CTGCTGGCCG CTCTCGCGGA CGCGGGCGCG AGCGGCGTGA CCGTGACGTC GCTGCACCTC
AAGCCGCACA CGAGGGAGTG GTTCCTGGGG TGGCTCGGGC AGGTGCGGCC GGACCTCGTC
CCGCGGTACC AGGATCTCTA CCGCGGTCGG GTCTACGCCC CGCCGGAGTA CCGGCGATGG
CTCGCCGCGC GGGTGGCGCC GCTGCTCGCC AGGCACGGGT TCGCGCGCGG CGTCGGCGGG
CGCGCCGGCG CCGACATCGA GCCGAGCGCA CGCGAGGACG ACGCCCGGTA CCCGGCCGGC
GCGCTCGCCG GAGCGTCCGG ACGCGGAACC GGGCCGGCCC CCGCAGTGGC TGCGGCGGCC
GGCCCGGATC AGGACGCGCT GTTCTGA
|
|---|
| Protein sequence | MRWDTQELDG AAGAGELPGL GLRGLVRSVT TPEFAGVTFH EVAAKSLLNR VPSGSAMPYG
WTINPYRGCT HACTYCFARP THTYLDLDAG EDFDRQIVVK VNAADVLHAE LRRPGWNREH
VAMGTNTDPY QRAEGRYRLM PGIVAELARS GTPFSILTKG TLLRRDLPLL TAARKDVAVG
LGVSLTLLDA GLQASLEPGT PSPAARLGLV RAARDAGLDC GVFVAPVLPW LTDSADHLDA
LLAALADAGA SGVTVTSLHL KPHTREWFLG WLGQVRPDLV PRYQDLYRGR VYAPPEYRRW
LAARVAPLLA RHGFARGVGG RAGADIEPSA REDDARYPAG ALAGASGRGT GPAPAVAAAA
GPDQDALF
|
|---|
| |