Gene Bcav_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2002 
Symbol 
ID7858622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2281297 
End bp2282097 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content72% 
IMG OID643866096 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_002882019 
Protein GI229820493 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.129661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0718181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCCGA GCAGACGGGA ACGCGAGAAC GCGAAGCGGC GCTACCAGAA GTGGGAGCAG 
CGCCGTGCCG CCGCGGAGAA GGTGCGCCGC GAGCGGCGCA TCGTCGGTGG CGTGCTCGCC
GGCTTCCTCG CGCTCGTGCT CATCGGCGGC ATCATCTGGA CCCAGACGCG GCCGGACGAG
GGCGATCCCG CCGCGACGCC GACGGCGACC GACCCCTCGG CCACCGACGC CCCGACGGAC
GCGCCCACGG ACTCGCCCGC TCCGCTGCCG ACCACGAACC CTCAGATGTT CGAGGCGCCG
CCGCCGCCGG CCGACGCGCT CGCCTCGACG TGGACGTGGA CGATCACGAC CAACCTGGGC
GACATCGTCG TCGAGCTCGA CGGCGCCGCG GCTCCGCAGG CCGTCGCCTC GTTCAACATG
CTGGCCGGGA GCGGCTTCTA CGACGGCACC GCGTGCCACC GGCTGCTGCC GGACACGTTG
CTGCAGTGCG GCGACCCGAC GGCGACCGGC AGCGGCGGTC CGGGGTACAC GTTCGGCCCC
GTCGAGAACC CGCCCGAGGA CGGCGTCTAC CCGTCGGGCA CCGTCGCGAT GGCGCGCGGG
GCCGCCGAAG ACAGCCAGGG GAGCCAGTTC TTCCTCGTCT TCGGTGAGTA CGTGAACCCC
GAACCGCCCG GTTACACCGT GTTCGGTACC GTGACCCAGG GTCTCGACAT CCTCCAGGCG
ATCGGCGCCG CCGGGACGCT CCCGGGCACG GAACGCCCCG CGGAGGACGT CATCATCGAG
GAAGTGAAGG TGCAGCAGTG A
 
Protein sequence
MSPSRREREN AKRRYQKWEQ RRAAAEKVRR ERRIVGGVLA GFLALVLIGG IIWTQTRPDE 
GDPAATPTAT DPSATDAPTD APTDSPAPLP TTNPQMFEAP PPPADALAST WTWTITTNLG
DIVVELDGAA APQAVASFNM LAGSGFYDGT ACHRLLPDTL LQCGDPTATG SGGPGYTFGP
VENPPEDGVY PSGTVAMARG AAEDSQGSQF FLVFGEYVNP EPPGYTVFGT VTQGLDILQA
IGAAGTLPGT ERPAEDVIIE EVKVQQ