Gene Bcav_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1994 
Symbol 
ID7858614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2271218 
End bp2272255 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content75% 
IMG OID643866088 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_002882011 
Protein GI229820485 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0145438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGG AACGCGACGA TCTCGCGCAG CTCACGTCGG CCGAGGCCGA CGAGATCGAA 
CGTGCCGCGG AGGCGGCTCT GCGGCCCCGA CGCCTCGCCG AGTTCGTCGG CCAGCGCGTG
GTGCGCGACC AGCTGTCGCT CGTGCTCGAG GCGGCCCTGG CCCGTCGCCG CCCGCCCGAC
CACGTCCTGC TCGCGGGCGG TCCGGGGCTC GGCAAGACGA CGCTCGCGAT GATCGTGGCG
AGCGAGGTCG GCGCGGCGCT GCGCCTCACG TCCGGGCCGG CCATCCAGCA CGCGGGGGAC
CTCGCGGCGA TCCTGTCGTC GGTGCAGGAG AACGACGTCC TGTTCATCGA CGAGATCCAC
CGGCTCGCGC GCCCGGCCGA GGAGATGCTG TACCTCGCGA TGGAGGACTT CCGCGTCGAC
GTCGTCGTGG GGAAGGGCGC CGGTGCGACG GCGATCCCGC TGGCCCTCCC ACCGTTCACC
GTGGTGGGCG CGACCACCCG GGCGGGGCTG CTCCCGGCTC CGCTGCGCGA CCGGTTCGGG
TTCACCGGGT ACCTGGACTT CTACGAGGTC GCCGAGCTCG AGCAGGTGCT CGAACGCTCG
GCCCGGCTGC TCCGTGCGGA GCTGACCCCG GCGGCGGGCG CGGAGATCGC CTCCCGGTCC
CGCGGGACGC CGCGCATCGC GAACCGCCTG CTGCGCCGGG TGCAGGACTG GGCTCAGGTG
CGGGGGAGCG GAGTCGCCGA CGTCGACGCC GCCCGTGCCG CGCTCGAGGT CTTCGAGGTC
GACGAGCGCG GGCTCGACCG GCTCGACCGC GGCGTCCTGC GTGCCCTTTG CGTGCGGTTC
CGCGGCGGCC CGGTGGGCCT CGGCACCCTG GCCGTGGCCG TGGGCGAGGA GCCCGAGACC
GTCGAGACGG TCGCCGAGCC GTTCCTCGTG CGCGAGGGGC TGATCGCGCG TACGCCACGG
GGGCGGGTGG CGACCGCCGA GGCGTGGGCT CACCTCGGCC TGGAGCCGCC CGCACCACCG
GACACCCTGT TCTCCTGA
 
Protein sequence
MAEERDDLAQ LTSAEADEIE RAAEAALRPR RLAEFVGQRV VRDQLSLVLE AALARRRPPD 
HVLLAGGPGL GKTTLAMIVA SEVGAALRLT SGPAIQHAGD LAAILSSVQE NDVLFIDEIH
RLARPAEEML YLAMEDFRVD VVVGKGAGAT AIPLALPPFT VVGATTRAGL LPAPLRDRFG
FTGYLDFYEV AELEQVLERS ARLLRAELTP AAGAEIASRS RGTPRIANRL LRRVQDWAQV
RGSGVADVDA ARAALEVFEV DERGLDRLDR GVLRALCVRF RGGPVGLGTL AVAVGEEPET
VETVAEPFLV REGLIARTPR GRVATAEAWA HLGLEPPAPP DTLFS