Gene Bcav_1992 details

Gene Information

• Locus tag: Bcav_1992
• Symbol: ruvC
• ID: 7858612
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Beutenbergia cavernae DSM 12333
• Kingdom: Bacteria
• Replicon accession: NC_012669
• Strand: +
• Start bp: 2269941
• End bp: 2270540
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 643866086
• Product: Holliday junction resolvase
• Protein accession: YP_002882009
• Protein GI: 229820483
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.0125062
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATCCTCG GGATCGACCC GGGGCTCACA CGGTGCGGCA TCGGCGTAAT CGAGTCGCTG 
CCCGGCCGCC GCGTGCGCCT CGTCGACGTC GGCGTGGCGA CGACGCCCGC CGGTGATCCC 
CTCGAGGCAC GCCTGGTGTC CGTCGCGGAC CGGATCGACG AGTGGCTCGA CGCGCACCAG 
CCGGACGCCG TCGCCGTCGA GCGGGTCTTC GCGCAGGCGA ACGTGCGCAC GATCACCGGT 
ACGGCCCAGG TGGCCGGGCT CGCGATGGTC GCCGCCGCGC GCCGCGGCAT CCCGGTCGCC 
ACCCACACCC CGAGCGAGGT CAAGGCCGCG ATCACCGGCT CCGGCCGCGC CGAGAAGCCC 
CAGGTGCAGG AGATGGTGGC GCGGTTGCTC GCGCTCGCGG AGCGGCCCCG TCCCGCCGAC 
GCCGCCGACG CGCTCGCCCT CGCGATCTGC CATGCCTGGC GCGGAGGGGC GACGACGCCG 
GCATCCTCTC CGGATCGTGG TGCTCCCACG GCCGCGCAGC GTGCGTGGGC GCAGGCCGAG 
GCGGCCGCCC GCCGCCCCGC GCGGCGCCTC GACGTCGTGC GCGCCGGGCG GCTACGGTAG 

 

Protein sequence

MILGIDPGLT RCGIGVIESL PGRRVRLVDV GVATTPAGDP LEARLVSVAD RIDEWLDAHQ 
PDAVAVERVF AQANVRTITG TAQVAGLAMV AAARRGIPVA THTPSEVKAA ITGSGRAEKP 
QVQEMVARLL ALAERPRPAD AADALALAIC HAWRGGATTP ASSPDRGAPT AAQRAWAQAE 
AAARRPARRL DVVRAGRLR