Gene Bcav_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1983 
Symbol 
ID7858603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2262865 
End bp2264037 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content74% 
IMG OID643866077 
ProductPhosphatidylinositol alpha-mannosyltransferase 
Protein accessionYP_002882000 
Protein GI229820474 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.636916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0126496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGATCG GCATCGTCTG CCCGTACTCG CTCGACGCGC CCGGCGGCGT CCAGGTGCAC 
GTGCGGGACC TCGCGCAGCG CCTCATCGGT CTCGGGCACG ACGTCAGCGT GCTGGCGCCG
GCGGAGGACG ACACCCCGGT CCCGGAGTAC GTCGAGGCGG CCGGGCGCAG CGTGCCCGTC
CGGTACAACG GGTCGGTCGC ACGGCTCTCG TTCGGACCGG TCACCGCCGC CCGGGTCCGG
CGCTGGCTGG ACGCGGGCGC GTTCGACGTC CTGCACATCC ACGAGCCGCT CGTGCCCAGC
GTGAGCCTGC TCGCGTTGTG GCTGGCGAGC GGCCCGATCG TGGGGACGTT CCACACCGCG
ACCGACCGGT CGCGCGCGAT GCAGGTCGCG TTCCCCCTGC TGCGCTCGTC GCTCGAGAAG
ATCGTGGCGC GGATCGCCGT CTCCGAGGAG GCGCGGCGGA CTCTCGTCGA GCACTTCGGG
GGAGACGCCG TCGTCATCCC CAACGGCGTG TACGTCGACA CGTTCTCGGG TGCCACGGTG
CGCCCGGAGT GGCAGGGCAC GCCCGAACGG CCCACCATCG CGTTCCTCGG CCGAACCGAC
GAGCCCCGCA AGGGCCTGCA CGTGCTGCTC GAGGCGGTGC CGCGCATGCT CGAGCAGCGG
CCCGGCACCC GCGTCCTGGT CGCTGGCCGC GGCGATCTGG ACGCCCTGCG GGCGGCCGCT
CCGGACGCGG TCGAGGTTCT CGGCGAGGTC GACGAGCAGG GCAAGGGCGA TCTCATGGCC
TCCGTCGACG TGTACGTCGC CCCCCAGACC GGCGGGGAGA GCTTCGGGAT CGTGCTGGTG
GAGGCGATGA GCGCCGGGGC CAGCGTCGTG GCGAGCGACC TGGCGGCCTT CCGTCGCGTC
CTCGACTCCG GGCGCGCCGG GTTCCTGTTC CCCACCGGAG ACCCGGCCGG CCTCGCGACG
GCGCTGCTCG CGGCGCTCGA CGACCCGGCG GAGCGCGACC GACGGCGGGC CTACGCCCGC
GACTGGTGCC ACCAGTACGA CTGGAGCGTG GTGACGGACC AGGTGCTCGA CGTGTACGGC
CTGGCGCTCG GCGAGGGCGA CGGGCACGTC GCGCAGGACC CGCTCGCACG ACGCATGCTC
TCGCGCCTGC TCGGTGGTGC CGATGACGAC TGA
 
Protein sequence
MRIGIVCPYS LDAPGGVQVH VRDLAQRLIG LGHDVSVLAP AEDDTPVPEY VEAAGRSVPV 
RYNGSVARLS FGPVTAARVR RWLDAGAFDV LHIHEPLVPS VSLLALWLAS GPIVGTFHTA
TDRSRAMQVA FPLLRSSLEK IVARIAVSEE ARRTLVEHFG GDAVVIPNGV YVDTFSGATV
RPEWQGTPER PTIAFLGRTD EPRKGLHVLL EAVPRMLEQR PGTRVLVAGR GDLDALRAAA
PDAVEVLGEV DEQGKGDLMA SVDVYVAPQT GGESFGIVLV EAMSAGASVV ASDLAAFRRV
LDSGRAGFLF PTGDPAGLAT ALLAALDDPA ERDRRRAYAR DWCHQYDWSV VTDQVLDVYG
LALGEGDGHV AQDPLARRML SRLLGGADDD