| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1973 |
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| Symbol | |
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| ID | 7858589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2250372 |
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| End bp | 2252537 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643866063 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_002881990 |
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| Protein GI | 229820464 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0990735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000349089 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGATCT GGCCCGGCCA CCCCTACCCG CTCGGGGCGA CGTACGACGG ATCGGGCACG
AACTTCGCCC TCTTCTCGTC CGTGGCGGAG CGTGTCGAGC TGTGCCTCGT CGACGACGGC
GGAGCGGAGC AGCGCGTCGA GGTCACCGAG GCGGATGCGC ATGTCTGGCA CGTGTACCTG
CCCGGCGTCG GCCCGGGTCA GCGGTACGGC TACCGCGTGC ACGGCCCGTG GGATCCCGCC
GAAGGGCACT GGTGCAACCC GGCCAAGTTC CTGCTCGACC CGTACGCGAA GGCGCACGAC
GGCGTCGTCG ACGGCGACGA GTCGCTCTAC TCCTACTCCT TCGGCGAGAC GCCGTCGCCG
ACGAGCGCGC TCAACACCGC CGACTCGCGC CAGCACACGA TGACGTCCGT CGTGACCAGC
CCGTTCTTCG ACTGGGGCCA CGACCGCCCG CCGGAGCACG AGTACCACCG CAGCGTCATC
TACGAGGCGC ACGTGCGCGG TCTCACGAAG ACCCACCCGA GCATCCCCGA GGAGATCCGC
GGCTCCTACG CCGCCCTCGC GCACCCGGCC ACGATCGAGC ACCTGACGCA GCTCGGCGTC
ACCGCCATCG AGCTCATGCC CGTGCACCAG TTCGTCAACG ACGCCACGCT CGTGAGCAAG
GGTCTGTCCA ACTACTGGGG CTACAACACG ATCGGCTTCT TCGCCCCGCA CAACGCGTAC
GCGAGCTTCG GCACCCGCGG CGAGCAGGTG CAGGAGTTCA AGACAGCGGT GAAGGCGCTG
CACGAAGCGG ACATCGAGGT GATCCTCGAC GTCGTCTACA ACCACACCGC TGAGGGCAAC
CACATGGGTC CGACCCTCTC GTTCCGCGGC ATCGACAACG CCGCGTACTA CCGCCTGGTC
GACGACGACC GCCTGCACTA CTTCGACACG ACCGGCACGG GCAACTCCCT GCTCATGCGC
TCGCCGAACG TGCTGCAGCT GATCATGGAC TCGCTGCGCT ACTGGGTGAC GGACATGCAC
GTCGACGGGT TCCGCTTCGA CCTGGCCGCC ACCCTCGCCC GGCAGTTCCA CGAGGTCGAC
AGGCTGAGCG CCTTCTTCGA CCTCGTGCAC CAGGACCCGG TCATCTCGCA GGTGAAGCTG
ATCGCCGAAC CGTGGGACCT GGGCGACGGC GGCTACCAGG TGGGCGGGTT CCCACCGCTG
TGGACGGAGT GGAACGGGCG CTACCGCGAC ACGGTGCGCG ACTTCTGGCG CGGCGAGCCG
GCCACGCTCG GCGAGTTCGC GAGCCGCCTG ACCGGCTCCG CCGACCTGTA CGAGCACACC
GGCCGCAAGC CGATCGCCTC GATCAACTTC ATCACGGCGC ACGACGGCTT CACGCTCGCC
GACCTCGTCT CCTACAACGA GAAGCACAAC GACGCCAACG GCGAGGACAA CAAGGACGGC
GAGTCGCACA ACCGGTCCTG GAACTGTGGC GTCGAGGGCC CCACGGACGA CGAGTCGATC
CGCACGCTGC GGGCGCGCCA GCAGCGCAAC TTCCTCACCA CGCTGCTGCT CTCCCAGGGC
GTGCCGATGC TCGCGCACGG CGACGAGATC GGCCGCACGC AGCGGGGCAA CAACAACGTC
TACTGCCAGG ACAACGAGCT CGCGTGGATG GACTGGGACG GTGTCGACGC CGCCGGCACC
GCGCTCCTAG AGTTCACCCG CCAGGTCATC CGGCTCCGGA ACGAGCACCC GGTCTTCCGG
CGTCGTCGGT TCTTCGACGG GCGGACGACG GACGCCGACG GCCACCAGGT CGAGGACATC
GCCTGGTTCA CGCCGGCCGG CGCCACCATG ACTCCCGAGG AGTGGAACAC GGCCCAGGCC
CGCGCCGTCA TGGTCTTCCT GAACGGCGAC GCGATCGGTG AGCCGGACGA GCGCGGTGCG
CCGATCGTCG ACGACTCGTT CCTCCTGCTG TTCAACGCGA ACCGCGACCC GATCGACTTC
GTCCTGCCGC CGGCGTACTA CGGCACCGCC TGGGAGGGCG TGCTCGACAC GGACTCCTCG
ATCGAGACCT GGCAGGTGCT CGCGGGCGGG GCGACGGTGC GGCTCGCCGC GCACAGCGTC
GCGGTCCTGG GCCGGCCGAG CACGCTCCGC GAGGCCGGCA CGGAGCAGGA CGGGCTCCAG
GCGTGA
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| Protein sequence | MQIWPGHPYP LGATYDGSGT NFALFSSVAE RVELCLVDDG GAEQRVEVTE ADAHVWHVYL
PGVGPGQRYG YRVHGPWDPA EGHWCNPAKF LLDPYAKAHD GVVDGDESLY SYSFGETPSP
TSALNTADSR QHTMTSVVTS PFFDWGHDRP PEHEYHRSVI YEAHVRGLTK THPSIPEEIR
GSYAALAHPA TIEHLTQLGV TAIELMPVHQ FVNDATLVSK GLSNYWGYNT IGFFAPHNAY
ASFGTRGEQV QEFKTAVKAL HEADIEVILD VVYNHTAEGN HMGPTLSFRG IDNAAYYRLV
DDDRLHYFDT TGTGNSLLMR SPNVLQLIMD SLRYWVTDMH VDGFRFDLAA TLARQFHEVD
RLSAFFDLVH QDPVISQVKL IAEPWDLGDG GYQVGGFPPL WTEWNGRYRD TVRDFWRGEP
ATLGEFASRL TGSADLYEHT GRKPIASINF ITAHDGFTLA DLVSYNEKHN DANGEDNKDG
ESHNRSWNCG VEGPTDDESI RTLRARQQRN FLTTLLLSQG VPMLAHGDEI GRTQRGNNNV
YCQDNELAWM DWDGVDAAGT ALLEFTRQVI RLRNEHPVFR RRRFFDGRTT DADGHQVEDI
AWFTPAGATM TPEEWNTAQA RAVMVFLNGD AIGEPDERGA PIVDDSFLLL FNANRDPIDF
VLPPAYYGTA WEGVLDTDSS IETWQVLAGG ATVRLAAHSV AVLGRPSTLR EAGTEQDGLQ
A
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