Gene Bcav_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1970 
Symbol 
ID7859546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2245649 
End bp2246089 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content73% 
IMG OID643866060 
Producthistidine triad (HIT) protein 
Protein accessionYP_002881987 
Protein GI229820461 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.939838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000383714 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACCC TGTTCACCCG CATCATCGAC GGCGAGCTTC CCGGCCGGTT CGTGTGGGCC 
GACGACGTGT GCGTCGTCCT GCTCACGATC GAGCCGATCA CGAACGGGCA CGCGATGGTC
GTGCCGCGCA CCGAGGTCAC GCAATGGCTG GACGCGTCCG ACGAGCTCAT GGCGCGCCTC
GTGAGCGTGG CCCGACGCGT CGGGACAGCC CAGCTCGAGG AGTTCGGCGG GGAGCGCGCC
GGGCTGCTCG TCGAGGGCTA CGGCGTGCCG CACCTGCACG TGCACGTGTG GCCGACGTCG
TCGCCGGCCG ACTTCGACGT GCACCGCGTG CAGCGCGACC TGCCGGCCGC CGTGCTGGAC
GAGCACGCGG CGCGGCTGCG GGACCGCCTC GCGTCGCAGG GCCACGCGCT CGAGGTCGCC
GAGGCCCTCG AGCTCAGCTG A
 
Protein sequence
MATLFTRIID GELPGRFVWA DDVCVVLLTI EPITNGHAMV VPRTEVTQWL DASDELMARL 
VSVARRVGTA QLEEFGGERA GLLVEGYGVP HLHVHVWPTS SPADFDVHRV QRDLPAAVLD
EHAARLRDRL ASQGHALEVA EALELS