| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1962 |
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| Symbol | |
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| ID | 7858355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2238270 |
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| End bp | 2239520 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 643866052 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_002881979 |
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| Protein GI | 229820453 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.128564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000452801 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGAACC CGACGCCGTT GCTCGAGCCG GCGGACGGCG TCCCGCCCGT CATCACGACC
GACGCCGCGC TGACCGAGTA CGTCGAGGCA GTGGCACGTG CGGACGGCGC GGTCGCCGTC
GACGCCGAAC GTGCCTCCGG CTACCGGTAC GGCCAGCGCG CCTACCTCGT GCAGATCCGT
CGCCTGGGCG CCGGGACGGC GCTCATCGAC CCGATCGCGT GCCCGGACCT CAGCGGACTG
TCAGCCGCGC TCGGCGACGC CGAGTGGGTG CTGCACGCGG CGAACCAGGA CCTGCCGTGC
CTCGCGGAGG TCGGGCTCGT GCCGCGGCAC GTCTTCGACA CGGAGCTCGC CGGACGGCTG
CTGGGCCGCG AACGCGTGGG CCTCGCGGCG ATCGTCGAGC AGGAGCTCGG ACTCACGCTC
GCGAAGGAGC ACTCCGCCGT CGACTGGTCC ACCCGCCCGC TCCGCGAGGA CTGGCTGCGG
TACGCAGCGC TCGACGTCGA GGTGCTCGTC GAGCTGCGCG ACGCGCTCGA GCGCGACCTC
GTCCGCGCCG GCAAGGCCGA GTGGGCCCGC GAGGAGTTCG AGGCGCTGCG CCTCGCCCCG
CCGCCGGCGC CCCGACCGGA GCCGTGGCGC CGGACGTCGG GGTCCCACGC GGTGCGGGAC
CCCCGTCAGC TCGCGGTGAT GCGGGCGCTC TGGGTCGAGC GCGACGCCGT CGGGCAGGAG
CGGGACATCG CGCCCGGCCG GGTGCTCCCG GATCGGGCCA TCGTTGCCGC AGCGACGGCC
CTGCCGCGTA CCGAGGCGGC GCTCGCCGGA CTTCGGGAGT TCTCCGGGCG CGGCGCGAAG
CGGCGTCTCG CCCGCTGGTG GGGCGCGGTC GCGGACGCTC TCGCGCTCGA CGCGTCCGAG
CTGCCCGCCC GCCGCGGGCC GAGCCGCGAC ACGCTGCCGC CGCCGCGAGC CTGGGCGGAC
CGCAACCCCG AGGCTGCGGA GCGGCTCCGC GCGGTGCGGG CGCGCGTTCG TGAGCTCGCC
GCGGCGAACA CGCTCCCCCA GGAGAACCTC CTGGCGCCCG ACACCCAGCG GCGGCTCTCC
TGGGAGCCCC CGTCGCCGGC CACGGACGAG GCGGTGGTGT CACGGTTGGC GGCGCTGGGA
GCGCGGCCGT GGCAGATCGC GCTCGTCGCT GCGCCGCTCG CGGCGGCCGT GCGCGACCCG
GCGTCGGTTC CCGAGCCGGC GTCAGAGCCG GAGCCGGCAC CCGACGCCTG A
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| Protein sequence | MTNPTPLLEP ADGVPPVITT DAALTEYVEA VARADGAVAV DAERASGYRY GQRAYLVQIR
RLGAGTALID PIACPDLSGL SAALGDAEWV LHAANQDLPC LAEVGLVPRH VFDTELAGRL
LGRERVGLAA IVEQELGLTL AKEHSAVDWS TRPLREDWLR YAALDVEVLV ELRDALERDL
VRAGKAEWAR EEFEALRLAP PPAPRPEPWR RTSGSHAVRD PRQLAVMRAL WVERDAVGQE
RDIAPGRVLP DRAIVAAATA LPRTEAALAG LREFSGRGAK RRLARWWGAV ADALALDASE
LPARRGPSRD TLPPPRAWAD RNPEAAERLR AVRARVRELA AANTLPQENL LAPDTQRRLS
WEPPSPATDE AVVSRLAALG ARPWQIALVA APLAAAVRDP ASVPEPASEP EPAPDA
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