| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1961 |
|---|
| Symbol | |
|---|
| ID | 7858354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2236848 |
|---|
| End bp | 2238065 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643866051 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_002881978 |
|---|
| Protein GI | 229820452 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.141974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000049161 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGGTC GACCGGTCGT CTTCGTCGAC GGCGCCCGCA CCCCGTTCGG GCGCGCCCGC
CCCGACGGGC TCTACGCCCA CACCCGCGCC GACGACCTCG CCGTCGCCGT CGTCCGCGAG
CTCCTGCGCC GTCACCCGGA GCTCCCGCCG GAGCGCGTCG GCGAGGTGGC GATCGCCGCG
ACCAGCCAGG TCGGCGACCA GGGCCTCACG CTCGGCCGCA CCGTCGCGCT GCTGGCCGGG
CTCCCCCGGA CCGTGCCCGG CTACGCGATC GACCGGATGT GCGCGGGCGC CATGACCGCC
GTCACGCAGG TCGCATCGGC GATCGCGGTG GGCGCCATCG ACGCCGCCCT CGCCGGCGGC
GTCGAGCACA TGGGCCGGCA CCCGCTCGGG AAGGACGCCG ACCCCAACCC GCGCTTCGTC
GCCGAGCGAC TCGTCGACGC CGACGCGCTC GTCATGGGCG CCACCGCCGA GAACCTGCAC
GACCGGTTCC CCGCCCTCAC GCGAGAGCGC GCCGACGCGT TCGGCGTCGC GAGCCAGACC
CGGTACGCCG ACGCTCTCGC GTCGGGGCGC ATCGAGCCCG ACCTCGTCCC CGTCGCGCTG
CGCGACCCGG AGCGCGGCTG GGGCCTGGCG ACGGCGGACG AGCCGCCCCG CCCGGGGACC
ACGCTCGAGG GTGTCGCCGG TCTGGCGACG CCGTTCCGCG CCGGTGGCCG CGTCACGGCG
GCGACGTCGT CGCCCCTCAC CGACGGCGCG ACCGCCGGGC TCGTCGCGGC GGAGTCCGTG
GCCCGCGAGC TCGGCCTGCC CGCGCGGATG CGGCTGGTCT CGTACGCGTA CGCGGGCGTG
GACCCGGAGG TGATGGGCGT CGGGCCGGTC CCCGCGACGC ACCGGGCGCT CGAGCTCGCC
GGCCTCGACA TCGCGCGGAT CGGCGCGTTC GAGATCAACG AGGCGTTCGC CGTCCAGGTC
CTCGCGTTCC TCGACGCGTT CGGGATTGCC GACGACGACC CGCGAGTCAA CCCCGACGGC
GGCGCGATCG CCGTCGGGCA CCCGCTCGCC GCCTCCGGTG TGCGTCTCAT GGTGCAGCTC
GCCCGTCGGT TCGAGGCCGA CCCGTCGATC CGGTACGGCC TGACCACGAT GTGCGTGGGG
CTCGGCCAGG GCGGGACCGT GATCTGGGAG AACCCGCACC ACGCGGACTA CGTGAGCGCC
GAGGAGGACG CCCGATGA
|
|---|
| Protein sequence | MLGRPVVFVD GARTPFGRAR PDGLYAHTRA DDLAVAVVRE LLRRHPELPP ERVGEVAIAA
TSQVGDQGLT LGRTVALLAG LPRTVPGYAI DRMCAGAMTA VTQVASAIAV GAIDAALAGG
VEHMGRHPLG KDADPNPRFV AERLVDADAL VMGATAENLH DRFPALTRER ADAFGVASQT
RYADALASGR IEPDLVPVAL RDPERGWGLA TADEPPRPGT TLEGVAGLAT PFRAGGRVTA
ATSSPLTDGA TAGLVAAESV ARELGLPARM RLVSYAYAGV DPEVMGVGPV PATHRALELA
GLDIARIGAF EINEAFAVQV LAFLDAFGIA DDDPRVNPDG GAIAVGHPLA ASGVRLMVQL
ARRFEADPSI RYGLTTMCVG LGQGGTVIWE NPHHADYVSA EEDAR
|
|---|
| |