Gene Bcav_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1952 
Symbol 
ID7858345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2224980 
End bp2225348 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content71% 
IMG OID643866042 
ProductYCII-related protein 
Protein accessionYP_002881969 
Protein GI229820443 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00608029 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTTCC TGGTTCTGCT GGCCGAGAAG GACCACTTCG ATCGCTGGGA CGCGGCGGAC 
GAGGAGGAGC GTGATGCCGC CTTCGCCGCC TATCGGAGCT TCGCGGCCGC CGTGAAGGCG
CGCGGCAGGA TCGTCTGCGG TGATGCGCTG CACCGTCCGG AGACGGCGCG GACCGTCCGC
CCGGGCGAAC CCGGCCGCTC GGCCGAACGC GCGGCCACCG GCGGTCCCTA CGCCGAGACC
GTCGAGCAGA TCGGCGGCTT CTACGTGATC GACATGCCCA CGCTCGACGA CGCCGTCGAG
GCGGCCCGTC TTCTGCCGGC TGAGTACACC CTCGAGGTCC GACCCTGCCT CGGGGTCGAC
GTGGGGTGA
 
Protein sequence
MKFLVLLAEK DHFDRWDAAD EEERDAAFAA YRSFAAAVKA RGRIVCGDAL HRPETARTVR 
PGEPGRSAER AATGGPYAET VEQIGGFYVI DMPTLDDAVE AARLLPAEYT LEVRPCLGVD
VG