Gene Bcav_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1948 
Symbol 
ID7858341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2220970 
End bp2221851 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content77% 
IMG OID643866038 
Productaminoglycoside phosphotransferase 
Protein accessionYP_002881965 
Protein GI229820439 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.013285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGACG CCGAGTTCGA CATCACCCCG GACCTCGTGA CCGCGCTGCT CGCCGAGCAG 
CACCCCGACC TCGCCCACCT TCCGGTACGG ATCGTCGCCG AGGGGTGGGA CAACGTCGTC
GTCCGGCTCG GCGAGGACCT CGGCGTCCGC CTGCCCCGCC GGGAGGTCGG CGCCAGGTTG
CTGGAGAACG AGCAGACCTG GCTCCCCCGG CTGGCCGACC GGCTCCCGGT GACCGTCCCC
GCCCCGGTGC GCGTCGGCGT CCCGGGATCG GGCTACCCGT GGCCGTGGAG CGTGGTGCGG
TGGACGTCCG GCACGACGGC GGCGCGCACG CCCGTCGAGA GCCGTGCCGC CTGGGCGGCG
CACCTCGGCG AGGTCATCGG CGCCCTGCAC GCCCCGGCAC CCGACGACGC CCCGGTGAAC
CCGTTCCGCC GCGGACGCCT TGCGGACCGG GACGAGGTGC TGCGCTCCCG GCTGGACGCC
ATCGCCGGCG GGGTGCTCCC CCGCGACACG GTGGGGGGCC TGCGCCGCAT CTGGGCCGAG
GCCGTCGCCG CCCCGGACCA CGCCGGCCCG GCGCTGTGGA TCCACGGCGA TCCGCACCCC
GCGAACCTCG TGGTGGCCGA CGGGCGCCTC GTCGCGCTCG TGGACTTCGG CGACCTCACC
TCCGGCGACC CCGCCGTCGA CCTCTCCACC GCCTCCCTCG CGTTCGACGC TCCGGGGCGC
GCCGCGTTCC TGGCGGCGTA CGGCGGCGTC GACGACGCGA CGTGGTCCCG CGCACAGGGC
TGGGCCGTCG TGATGGCGGT CGCCGTGCTG GCGCACGAGC CCGTGGATCG GACCAACGCC
GCGTGGGCCC GGCCCGCGAT GCTCCGCCTC GGCGAGTCCT GA
 
Protein sequence
MPDAEFDITP DLVTALLAEQ HPDLAHLPVR IVAEGWDNVV VRLGEDLGVR LPRREVGARL 
LENEQTWLPR LADRLPVTVP APVRVGVPGS GYPWPWSVVR WTSGTTAART PVESRAAWAA
HLGEVIGALH APAPDDAPVN PFRRGRLADR DEVLRSRLDA IAGGVLPRDT VGGLRRIWAE
AVAAPDHAGP ALWIHGDPHP ANLVVADGRL VALVDFGDLT SGDPAVDLST ASLAFDAPGR
AAFLAAYGGV DDATWSRAQG WAVVMAVAVL AHEPVDRTNA AWARPAMLRL GES