Gene Bcav_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1947 
Symbol 
ID7858340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2219660 
End bp2220940 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content76% 
IMG OID643866037 
Productproteinase inhibitor I4 serpin 
Protein accessionYP_002881964 
Protein GI229820438 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4826] Serine protease inhibitor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0171189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCTC GCCGCGCCCA TCTCGGTGCC GGGACCCTCG CCGCCGCTGT GCTCGTGCTC 
GTCGCCTGCC AGCAGCCCGC GCCGGGAGAG CCCGACCAGC GTTCCGACGC GGAGCGCGTC
GTGGTCCAGG TCTCGGATGC GGAAGCGGCG ACCGACGTCG TCTCGGCGAC CGAGGCGTTC
GGACTCACGA TGCTCGCGTC GGGCGACGCC GACTCGAACG TCGTCACGTC GCCGGCCTCC
GCCGTCGTCG CCCTGGCGAT GCTCGCCGAA GGTGCGCGCG GCGTCAGCGA GGCGGAGCTG
GACGCGCTCC TCGGCGCATC CGGCCCCGAC CGCACGGACG CCGTGGGCGC CCTGCTCGCC
GCGCTGCAGG AGCACGACGG CGATCCCGCC CTCGCCGCCG CCGACGAGCT GCCGGAGACG
CCTCTCGCGC ACCTCGCGAA CCAGATCGTT CTCGACGAGG GGTTCGAGGT GCGCGCGGAG
TTCCTCGACA CGCTGGCCGC CGGGTACGGC GCCGGGATCG CGACGGCGGA CCTCGCCACC
CGCGACGGCG TGCGGGTGCT CGGCGCCTGG GTCCGCGAGC ACACCGGCGG GCTCATCCCG
GGCTCGGCGA TCGAGCCCAA GCCCGAGCTG CGGCTGGTGC TCCAGAACGT CGTGGTGCTC
GCCGCACGCT GGGAGAGCCC GTTCGACGCG AGCGACACGC GGGACGTTCC CTTCGCCGTC
CGGGCGGACG ACGTCCCGCT GGTCCGCACG ATGCACGGTC TCCGGGAGGT TCCGTACGCG
GAGGTCGACG GCTGGCGGGC TGCCCGGGTG CCGTACGCCG AGGCCTTCAG CGCCGACCTC
GTGCTGCCGC CGGACGGCGT CGATCCGGCG GACGTGCCGG CCGGGACGCT CGGCGCGCTG
GTCGCGGCGC TCGACGCCGC GCAGCCGGTC GAGGTCGAGC TCGCGGTCCC GGCGCTGGAC
CTGCCGCCTG CTCGGCTCGC GCTCGCGCCG GCGATCGAGG CGGCCGGCGC CGCCAGCCTG
CTCGACCCCG ACACGGCCGA CCTCACCGGG ATCGACGACG ATCTGTTCGT GGGCCAGGCC
GTGCAGCAGG CGATGCTGCG GATGGACGAG GAGGGGACCG TCGCGGCCGC GGTCACGGAG
ATCGGCGTGG AGCTGTCGTC GGGGGAGGCG CCGCGCGACG CCCGGGAGCT CAGCCTGGAC
CGCCCGTACC TCGTGCGGAT CGCGCACGAC GACACGGGCT GGCCGCTGTT CGTGGCCGCG
ATCCGGGACC CCCGGGGCTG A
 
Protein sequence
MTPRRAHLGA GTLAAAVLVL VACQQPAPGE PDQRSDAERV VVQVSDAEAA TDVVSATEAF 
GLTMLASGDA DSNVVTSPAS AVVALAMLAE GARGVSEAEL DALLGASGPD RTDAVGALLA
ALQEHDGDPA LAAADELPET PLAHLANQIV LDEGFEVRAE FLDTLAAGYG AGIATADLAT
RDGVRVLGAW VREHTGGLIP GSAIEPKPEL RLVLQNVVVL AARWESPFDA SDTRDVPFAV
RADDVPLVRT MHGLREVPYA EVDGWRAARV PYAEAFSADL VLPPDGVDPA DVPAGTLGAL
VAALDAAQPV EVELAVPALD LPPARLALAP AIEAAGAASL LDPDTADLTG IDDDLFVGQA
VQQAMLRMDE EGTVAAAVTE IGVELSSGEA PRDARELSLD RPYLVRIAHD DTGWPLFVAA
IRDPRG