| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1936 |
|---|
| Symbol | |
|---|
| ID | 7858329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2206633 |
|---|
| End bp | 2207160 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643866027 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002881954 |
|---|
| Protein GI | 229820428 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0500735 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTTC CGCGCCCTGC CGTTCTCCCG CCCCCCGTCC ACGTGGAGCG GCTGTGGCCG
AGCCCGGGCT TCTGGGCGCT CGGACCGGGG GCAGGGCTCT TCGCCGGCCT CGCGCTCACC
CCGGTGGGCC AGGGCGTCGC CCTGTCCGCC GGATTCGCCG TGTGCCTGCT CGTGCTGGGG
CTGCTGGGGG CCGGGTCGCC GACCCTCGCG GTCGTGGGAG GCGCCCGCCC AGGCGTCCGG
GCGGGACGCG CGTTCCTCCC GGTCGAGCAC ATCGGAGCCG TCGACGCGCT CGACGAGGCG
CAGACGCGCG ACGTGCTCGG CCCGGGCGCT GACGCGCGGG CGTTCGCCGT GCACCGTGGC
TGGATCCGCC GGTCGGTCCG GATCGCCGTC GTCGACCCGC GAGACCCCGC GCCCTACTGG
CTCCTCTCGA GCCGTGACCC GCAGGCGCTC GCGGACGCCG TCCGGGCGCT ACCCCGGCGC
CCGGACGGTC ATGATGGTCA GGCCGCGCAC TCCGAGCACA CGAGCTGA
|
|---|
| Protein sequence | MSVPRPAVLP PPVHVERLWP SPGFWALGPG AGLFAGLALT PVGQGVALSA GFAVCLLVLG
LLGAGSPTLA VVGGARPGVR AGRAFLPVEH IGAVDALDEA QTRDVLGPGA DARAFAVHRG
WIRRSVRIAV VDPRDPAPYW LLSSRDPQAL ADAVRALPRR PDGHDGQAAH SEHTS
|
|---|
| |