| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1933 |
|---|
| Symbol | |
|---|
| ID | 7858326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2204134 |
|---|
| End bp | 2205264 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643866024 |
|---|
| Product | DNA-binding protein |
|---|
| Protein accession | YP_002881951 |
|---|
| Protein GI | 229820425 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.786904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0954869 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGC TGGAGCTGGT CGGTCTGCAC ACAGACGGCG ACCACCTCGT TCTCCTGGCC
CCCGACGGCC AGCGGCACAA GCTGCCGATC GACGACGCGC TGCGCGCCGC CGTCCGGCGT
GATCGCCCCC GGCTGGAGCA TCTGCGCGCC ACCGAGGAGA GCACCCTGCG CCCGCGGGAG
ATCCAGGCGA GGATCCGGGC CGGCGCCACG GAGGCGGACG TCGCGAGCGA GTCCGGGCTG
CCCGTGGAGG CGGTGCTGCG CTACTCGGGC CCCGTCACGG ACGAGCGCGC CTGGATCGCG
AGCCAGGCGC AGGAGCTGCC GATCGGGCGC GAGCCCGGCG CACCGACGCT GGGCGACCTC
GTGGTCGACC GCCTCGCGGC GCGGGGGGTC GAGGCCGAGC TCACCTGGGA CGCGGTGCGC
CGCGCGGGCG AGCCGTGGGA GGTGCTCGTG CGGTTCGCCG CCGGGGACTC GCCCCGCGAG
GCCCGGTGGA GCGTCGACCT CGTGGCTCGC ACGTTGGTGG CGCTCGACGA CGAGGGACGC
TGGCTGTCCG AGACCGAGCT CGGGCAGGCG GGCCCCCGCC GGCACCTGAG CGCGGTGCGC
GCGCGCCTGT ACGACGTCGA GGCCGACGCC GACATCAGCT CGCCGCGCAT CTCCAGCCAG
CACCCGTCCC TGCGCGGGCG CGCGCCGCTC GACGCCGTCA TCCGGGACGC CCGCCCCCGG
CCCGCGGCGT CGTCCGAGGA TGCCGCGCCC GCCACCGAGG CATCCGACGA GCTCCCGGAC
GAGACCGTCG ACGCGCCGCA GGAGCAGGCC GAGCCGGAGC ACCCGTCCGC CGCGACCGAA
CGGCTGCTCG ACGAGCTTGA CGCCTCCCGC GGGACGCGGC AGCCGCTGGA CACCCTGCCC
GACGACCACA CCGACGACGC CCCCACGCTG TTCGACCACG CGCCGGAGCA GGACGAGCGG
ACGTCCGCCG AGCCGGCGCC CGCCGCACGC GTGGTCGCCC TCCCGACGCC TCCCCCGCAG
GCGGCGGACG TGCCCGACGA ACCGGCGGCG CCCGCCCGCG GCCGGCACCG CACCAAGCGG
ACGTCCGTGC CGAGCTGGGA CGAGATCGTC TTCGGCGCCA AGCCGGAGTG A
|
|---|
| Protein sequence | MVELELVGLH TDGDHLVLLA PDGQRHKLPI DDALRAAVRR DRPRLEHLRA TEESTLRPRE
IQARIRAGAT EADVASESGL PVEAVLRYSG PVTDERAWIA SQAQELPIGR EPGAPTLGDL
VVDRLAARGV EAELTWDAVR RAGEPWEVLV RFAAGDSPRE ARWSVDLVAR TLVALDDEGR
WLSETELGQA GPRRHLSAVR ARLYDVEADA DISSPRISSQ HPSLRGRAPL DAVIRDARPR
PAASSEDAAP ATEASDELPD ETVDAPQEQA EPEHPSAATE RLLDELDASR GTRQPLDTLP
DDHTDDAPTL FDHAPEQDER TSAEPAPAAR VVALPTPPPQ AADVPDEPAA PARGRHRTKR
TSVPSWDEIV FGAKPE
|
|---|
| |