Gene Bcav_1931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1931 
Symbol 
ID7858324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2202285 
End bp2203433 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content77% 
IMG OID643866022 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_002881949 
Protein GI229820423 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0734403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.150142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGG CGCCGGCGGC ACCGGCGGAC CTGCTGCCCC CGACGGCGAC GCCGGGCCTC 
GCGGGAGTCC TCGGCGACGC GGCCCGCTCG CTCGGCACCG AGGTCGGCGG TCCCTCCGCC
GGCCTCGCCC TGGCGCCGGG GTCGCGCGTC TGCGTGGTCC TCGTCGACGG GCTCGGGTGG
GAGGCGGTGC AGGCGCGCCT CGGGCACGCC CCGGTGCTGC GTGGGCTCGT GCGCGGCGGT
GAGCCGGTCC GAGCCCCGTA CCCCTCGACG ACGGCGGCCA GCCTCGCGAC GTTCGCGACG
GGGGTGCTCC CGGGTCGCAC CGGGATGCTC GGGTACACGG TGCGCTCACC GCTCACGGGC
GGTCTGCTCA ACCTCGTCTC GTGGAACGCC CACCCCGGCC CGCCGCCGGA GCCGACGGCC
TGGCAGCGCG AGCCGACCAC GTTCGAGGCG CTCGTGGCGG CCGGCAGCAC GGTGACGAGC
CTCGGGCCCA CCCGGTTCGC CGGTTCGGGC CTGACGCGTG CCGCCCTGCG CGGCCCGGCG
TTCGTCGGGG CGGACGCGCT CGAGGACCGC GTGGACGCGG CGCTCGCCGC CCTGCGCCGG
CCGGGCCTCG TCTACCTGTA CTGGGGCGAC CTCGACAAGG TGGGCCACCA CGAGGGCTGG
TCCTCGCCCG AGTGGGGCGA GCACCTGGGC ATGGTCGACG CGGCGCTCGG GCAGCTGCTG
CGGCGGGCTC CGCGCGGGAC GACGGTGATC GTGTGCGCCG ACCACGGGAT GGTGGACGTG
ACGTCCCGCG TCGACGTGGC GGACGTACCG CACCTGTCGG CCGGGGTCCA GCTCGTGGCG
GGCGAGCCGC GCGCGTCCCA CGTGTACTGC GAACCCGGTG AGGCCGACGC CGTCGCGGCG
CGCTGGCGCG ACGTGCTCGG CGACGCGGCA TGGGTCCTCA CCCGCGCAGA AGCCATCGCC
GCCGGCCTGT TCGGCGAGGT GGCGCAGAGG TTCCACGACG TCGTGGGCGA CGTCGTGGTC
GCCGCCGCCG GCACGACGGC GATCGTTGAC TCCCGGACCC AGACGCCGGC GTCGATCGGA
CTGATCGGCA TGCACGGCTC GCTGACGAGC GCCGAGACGC TCGTCCCGGC CGTCGTGGAG
GTGACGTAG
 
Protein sequence
MSTAPAAPAD LLPPTATPGL AGVLGDAARS LGTEVGGPSA GLALAPGSRV CVVLVDGLGW 
EAVQARLGHA PVLRGLVRGG EPVRAPYPST TAASLATFAT GVLPGRTGML GYTVRSPLTG
GLLNLVSWNA HPGPPPEPTA WQREPTTFEA LVAAGSTVTS LGPTRFAGSG LTRAALRGPA
FVGADALEDR VDAALAALRR PGLVYLYWGD LDKVGHHEGW SSPEWGEHLG MVDAALGQLL
RRAPRGTTVI VCADHGMVDV TSRVDVADVP HLSAGVQLVA GEPRASHVYC EPGEADAVAA
RWRDVLGDAA WVLTRAEAIA AGLFGEVAQR FHDVVGDVVV AAAGTTAIVD SRTQTPASIG
LIGMHGSLTS AETLVPAVVE VT