| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1928 |
|---|
| Symbol | |
|---|
| ID | 7858321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2196416 |
|---|
| End bp | 2198875 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866019 |
|---|
| Product | DNA topoisomerase IV subunit A |
|---|
| Protein accession | YP_002881946 |
|---|
| Protein GI | 229820420 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.769322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.297351 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCC GTTCCGCCCC ACCGCCCGCC GACGAGCGCA TCGTCGACAT CGACGTCGCC
GAGGAGATGC AGGACAGCTT CCTGGAGTAC GCCTACTCGG TCATCTACGC GCGCGCCCTG
CCCGACGCCC GCGACGGTCT CAAGCCCGTG CAGCGCCGGA TCCTGTACCA GATGGCGGAC
ATGGGGCTCC GACCAGACCG CGGCCACGTC AAGTCGGCAC GCGTCGTCGG CGAGGTCATG
GGCAAGCTGC ACCCGCACGG CGACACGGCG ATCTACGACG CCCTCGTGCG GATGGCCCAG
GCGTTCTCCC TGCGGCTCCC GCTGGTCGAC GGCCACGGCA ACTTCGGCTC GCTCGACGAC
GGACCCGCGG CGCCTCGGTA CACCGAGGCC CGTCTGGCTC CCGCTGCGCT GGTGATGACG
GGCGGGCTCG ACGAGGACGT CGTCGACTTC GTGCCGAACT ACGACAACCA GCTCACCCAG
CCCGAGGTCC TGCCGTCGGC GATGCCGAAC CTGCTGGTCA ACGGCGCGAG CGGGATCGCC
GTCGGCATGG CCACGAACAT GCCACCGCAC AACCTCGTGG AGGTGATCGC GGCGGCGCGG
CACCTCATCG CCCACCCGGA CGCCGACCTC GAGGCGCTCA TGCGGTTCGT GCCCGGACCC
GACCTGCCCG GCGGCGGCAA GATCGTGGGT CTCGACGGCG TCCGCGACGC CTACGTGAGC
GGGCGCGGCT CGTTCCGCAC CCGGGCCACC GCCCGCGTGG AGAACCTCAC CCCCCGGCGT
CGTGGCATCG TCGTCACGGA GCTGCCCTAC CTGGTCGGCC CCGAGCGCGT CACGGAGAAG
ATCGCCGAGG CGGTGCGGTC CAAGAAGGTG CAGGGCGTCG CCGGGGTCCA GGACCTCACG
GACCGGCAGC ACGGCCTCCG CCTCGTGATC GAGGTCAAGA GCGGGTTCAA CCCCGAGGCC
GTGCTCGAGC AGCTGTACCG CGCGACGCCG CTCGAGGAGT CGTTCGGGAT CAACAACGTC
GCGCTCGTCG GCGGCCAGCC CCGCACGATG GGTCTGCGCG AGCTGCTCAC CGTGTACGTG
GAGCACCGGC TCGTCGTCAC GCGGCGCCGC TCCGAGTACC GGCTGCGCCG CCGCTCCGAA
CGGCTGCACC TGGTCGAGGG CCTCCTCATC GCGATCGCCG ACATCGACGA GGTCATCGCC
GTCATCCGGT CGAGCGACGA CGCCGCGCAG GCCCGCGAGC GGCTGGTGGC GGTGTTCGAC
CTCTCGACGC CGCAGGCCGA CTACATCCTC GAGCTGCAGC TGCGGCGCCT CACGAAGTTC
TCGCGGATCG AGCTCACGTC CGAGCGCGAC GAGCTGCAGC GCGAGATCGC GGAGCTCACC
GAGCTGCTCG GCGACCCGGC CCGCCTGCGC GCCCTCGTCT CGGACGAGCT CGCCCAGGTG
GCGAACCAGC ACGGCACGCC GCGCCGCACC GTGCTCCTCG AGTCGGCCGG TGCGCCGGCC
GCTGCCGCCG CCGCGGCGCC CACGTCGGGG CGGGCCGGCG CCGTACCGCT CGAGATCCCC
GACACGCCGT GCTGGGTGCT CCTGTCGGCC ACCGGCCTGC TCGCGCGGAC GGGAGACGAC
GCGCGGCCCG TGCGGGAGGG GCGCCGCGCG GCGCACGACG CGATCCTCGG GTCCGTACCG
GCGACGGCGC GCGGCGAGGT CGGCCTCGTC ACGTCCCGCG GGCGGATCGT CCGGGTGAAC
GTCCTCGACG CGCCGGCGCT CCCGCCGACC GACGGTCCAC CCAGCCTGTC CGGCGGCGTG
GGCGTCGGCG AGCTGGTCGC GCTCGAGCCC GGCGAGCGCC CCCTCACGCT CGCCGCGCTC
GGGCCGGACG CGCCGGCGCT CGCGCTCGGC ACGGCGTCCG GCGTCGTCAA GCGCGTCTCG
CCTGAGGCGC CCGCGAAGGG CGACGCGTGG GAGGTCATCG CGCTCAAGGA CGGCGACCAG
GTGGTCGGCG CCGCGACCGC CGCCGACGAC GACGAGGTGG TGTTCGTGAC GTCGGACGCC
CAGCTGCTGC GCTTCCGGGC GGCGTCGGTC CGCCCGCAGG GCCGGGCGGC CGCGGGGATG
GCCGGGGTCC GCCTCGCCGG CGACGTCCGA GCCGTGGCGT TCGCCGCCGT CGCCCACGAC
GACGTCTCCA CGGCCGTCGT CGTCACCGTC GCCGGTTCCT CGGACGCCCT GCCCGGCACG
GCGGCCGGCA GCGCGAAGGT CACGCCGCTC GACCGCTTCC CGGCGAAGGG GCGGGGCACG
GGTGGTGTCC GCGCCCAGCG ATTCCTGCGC GGGGAGGACG CCGTGGTGCT CGCCTGGATC
GGCCCGGCAC CCGCGCGCGC CACCGGCGCG GGCGGTCAGG TGATCGAGCT CCCCGCCGTC
GACGAGCGGC GCGACTCCTC CGGGACGGCG CTCGCGGCGC CGGTGCACGC GATCGGGTGA
|
|---|
| Protein sequence | MARRSAPPPA DERIVDIDVA EEMQDSFLEY AYSVIYARAL PDARDGLKPV QRRILYQMAD
MGLRPDRGHV KSARVVGEVM GKLHPHGDTA IYDALVRMAQ AFSLRLPLVD GHGNFGSLDD
GPAAPRYTEA RLAPAALVMT GGLDEDVVDF VPNYDNQLTQ PEVLPSAMPN LLVNGASGIA
VGMATNMPPH NLVEVIAAAR HLIAHPDADL EALMRFVPGP DLPGGGKIVG LDGVRDAYVS
GRGSFRTRAT ARVENLTPRR RGIVVTELPY LVGPERVTEK IAEAVRSKKV QGVAGVQDLT
DRQHGLRLVI EVKSGFNPEA VLEQLYRATP LEESFGINNV ALVGGQPRTM GLRELLTVYV
EHRLVVTRRR SEYRLRRRSE RLHLVEGLLI AIADIDEVIA VIRSSDDAAQ ARERLVAVFD
LSTPQADYIL ELQLRRLTKF SRIELTSERD ELQREIAELT ELLGDPARLR ALVSDELAQV
ANQHGTPRRT VLLESAGAPA AAAAAAPTSG RAGAVPLEIP DTPCWVLLSA TGLLARTGDD
ARPVREGRRA AHDAILGSVP ATARGEVGLV TSRGRIVRVN VLDAPALPPT DGPPSLSGGV
GVGELVALEP GERPLTLAAL GPDAPALALG TASGVVKRVS PEAPAKGDAW EVIALKDGDQ
VVGAATAADD DEVVFVTSDA QLLRFRAASV RPQGRAAAGM AGVRLAGDVR AVAFAAVAHD
DVSTAVVVTV AGSSDALPGT AAGSAKVTPL DRFPAKGRGT GGVRAQRFLR GEDAVVLAWI
GPAPARATGA GGQVIELPAV DERRDSSGTA LAAPVHAIG
|
|---|
| |