Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1918 |
Symbol | |
ID | 7858311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2185828 |
End bp | 2186571 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 643866009 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002881936 |
Protein GI | 229820410 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0105994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCCCA CGCTTCGGCT GCTGCTGGTG CCCGGCGTGA GCCCGGGCCG CTGGGTGGCC ACCTGGCGGG GGCGCTTTTC GCGGGTCCCG CTCGAGCTCG TCCACGCCGA GGCGGCCGAC CAGGTGCGGA TGCTGGCCGA CGGCGTCGCT GACGTCGGGT TCGTCCGGCT CCCGATGCCG ACCGACGAGT TCCACGCCAT CCCGCTGTGG ACCGAGGCGA CGGTCGTCGT CGTGCCGCGC GACCACGTCC TGACAGCCGC CGACGAGGTC GAGCCGGGCG ACCTTGCCGG CGAGACGCTC CTCGTGCCCG TCGATGACGT GCTCGCCTGG GCGGACCCGC CCGGCGAGCC GTTCGCCGGC GTGACGCCGC GGACGACGGC GCAGGCGGTC GAGCTCGTCG CCGCCGGTGC CGGTGTGCTG GCCGTGCCGA TGTCCCTCGC CCGGGCGCAC CAGCGCAAGG ACGTGGCCTC CGTCCCGCTG CGGGACGGAC CCACGTCGCA GGTCGGCCTC GCCTGGCCGC GAGAGCGCGA CGACGACCGG ATCGAGGACT TCGTCGGCGT CGTCCGGGGC CGCACGGCGA ACAGCTCGCG CGGACGTCGC CCGGCACCGG GTGAGGCCGA CGCCGCGAGC GATCCCGCAC GTGCCGGTGC GCCCCGGGCC GGAGCCGCTC GCGCGCCCAG CCGAGCGCGG GGCCGCAGCG GCGCGCCGGG CAGCCGTCGC GCGCGCCGGG GCGGCCGGCG CTGA
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Protein sequence | MDPTLRLLLV PGVSPGRWVA TWRGRFSRVP LELVHAEAAD QVRMLADGVA DVGFVRLPMP TDEFHAIPLW TEATVVVVPR DHVLTAADEV EPGDLAGETL LVPVDDVLAW ADPPGEPFAG VTPRTTAQAV ELVAAGAGVL AVPMSLARAH QRKDVASVPL RDGPTSQVGL AWPRERDDDR IEDFVGVVRG RTANSSRGRR PAPGEADAAS DPARAGAPRA GAARAPSRAR GRSGAPGSRR ARRGGRR
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