Gene Bcav_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1918 
Symbol 
ID7858311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2185828 
End bp2186571 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content78% 
IMG OID643866009 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002881936 
Protein GI229820410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0105994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCCCA CGCTTCGGCT GCTGCTGGTG CCCGGCGTGA GCCCGGGCCG CTGGGTGGCC 
ACCTGGCGGG GGCGCTTTTC GCGGGTCCCG CTCGAGCTCG TCCACGCCGA GGCGGCCGAC
CAGGTGCGGA TGCTGGCCGA CGGCGTCGCT GACGTCGGGT TCGTCCGGCT CCCGATGCCG
ACCGACGAGT TCCACGCCAT CCCGCTGTGG ACCGAGGCGA CGGTCGTCGT CGTGCCGCGC
GACCACGTCC TGACAGCCGC CGACGAGGTC GAGCCGGGCG ACCTTGCCGG CGAGACGCTC
CTCGTGCCCG TCGATGACGT GCTCGCCTGG GCGGACCCGC CCGGCGAGCC GTTCGCCGGC
GTGACGCCGC GGACGACGGC GCAGGCGGTC GAGCTCGTCG CCGCCGGTGC CGGTGTGCTG
GCCGTGCCGA TGTCCCTCGC CCGGGCGCAC CAGCGCAAGG ACGTGGCCTC CGTCCCGCTG
CGGGACGGAC CCACGTCGCA GGTCGGCCTC GCCTGGCCGC GAGAGCGCGA CGACGACCGG
ATCGAGGACT TCGTCGGCGT CGTCCGGGGC CGCACGGCGA ACAGCTCGCG CGGACGTCGC
CCGGCACCGG GTGAGGCCGA CGCCGCGAGC GATCCCGCAC GTGCCGGTGC GCCCCGGGCC
GGAGCCGCTC GCGCGCCCAG CCGAGCGCGG GGCCGCAGCG GCGCGCCGGG CAGCCGTCGC
GCGCGCCGGG GCGGCCGGCG CTGA
 
Protein sequence
MDPTLRLLLV PGVSPGRWVA TWRGRFSRVP LELVHAEAAD QVRMLADGVA DVGFVRLPMP 
TDEFHAIPLW TEATVVVVPR DHVLTAADEV EPGDLAGETL LVPVDDVLAW ADPPGEPFAG
VTPRTTAQAV ELVAAGAGVL AVPMSLARAH QRKDVASVPL RDGPTSQVGL AWPRERDDDR
IEDFVGVVRG RTANSSRGRR PAPGEADAAS DPARAGAPRA GAARAPSRAR GRSGAPGSRR
ARRGGRR