Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1906 |
Symbol | |
ID | 7858299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2171216 |
End bp | 2172577 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643865997 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_002881924 |
Protein GI | 229820398 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.040301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000296805 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGATCC CCGCCGACCC GCAGGTCCTC GCCGGCCTCG ACGCCTGGCG CCGGCTGCCG GCCGTGCAAC AGCCCGAGTG GCCGGACGCG GCGGTGCTGG CCTCGATCGG CGCCGAGCTG GCGGCGGCGC CCCCGCTCGT GTTCGCCGGG GAGGCCGACG CGCTGCGCGA GAAGCTGGCC GCGGCGTCGC GCGGCGAGGC GTTCCTGCTG CAGGGCGGCG ACTGCGCGGA GACGTTCGCC GAGAGCTCCG CCGACAACAT CCGGAACAAG GTCAAGACCA TCCTCCAGAT GGCCGTCGTG CTGACGTACG GCGCGAGCCT GCCGATCGTG AAGATGGGCA GGATGGCGGG GCAGTACGCC AAGCCGCGCA GCACCGGCAC CGAGACGCGT GACGGCGTGA CGCTGCCGGC GTACCGCGGC GACACGATCA ACGGGCACGA GTTCACGGCC GCGTCACGCA CACCGGACCC CGCTCGGCTG CTCAAGGCGT ACCACACGTC GGCTGCCACG CTGAACCTCA TCCGCGCCTT CACGATGGGC GGGTTCGCGG ACCTCCGGCG GGTGCACGAG TGGAACCGCG GCTTCATGAC CAACCCGTCG TACAAGCAGT ACGACGAGCT CGCGTCCGAG ATCGACCGGG CGATCAGGTT CATGGCCGCC GCGGGAGCCG ACTTCGACGC GCTCCGCACC GTCGAGTTCT TCTCGAGCCA CGAGGGTCTG CTGCTCGACT ACGAGCGCCC GCTCACCCGC ATCGACTCCC GGACCGGGCT GCCCTACGAC TGCTCGGCGC ACTTCCTGTG GATCGGCGAG CGCACCCGCC AGCTGGACGG GGCGCACGTC GACTTCTTCT CCCGCGTGCA CAACCCGATC GGCGTCAAGC TCGGGCCGAC GACGTCCGGG GACGACGCCC TCGCGCTGAT GGACGCGCTC AATCCCGACG GCGTCGCGGG GCGGCTCACG TTCATCACCC GCATGGGTGC TGGCCGGATC CGCGACGCGC TGCCCGGCGT CGTCGAGAAG GTCGCCGCCG ACGGCCGGCC TGTCGTGTGG GTGTGCGACC CGATGCACGG CAACACGATC ACGTCGGCGA ACGGCTACAA GACCCGACGG TTCACCGACG TCATCGACGA GGTGCGCGGC TTCTTCGAGG TGCACGCCGC CACCGGCACC GTGCCGGGTG GGCTGCACGT CGAGCTCACC GGCGACGACG TGACGGAGGT GCTCGGCGGG GCGGAGGAGA TCGACGACGT CGGGCTCGCC CGGCGGTACA CGACGCTCGT CGATCCGCGC CTCAACCACC AGCAGTCCCT CGAGATGGCG TTCCTCGTGG CGGAGATGCT GCGGGAGCGT CCCACCGCGT GA
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Protein sequence | MTIPADPQVL AGLDAWRRLP AVQQPEWPDA AVLASIGAEL AAAPPLVFAG EADALREKLA AASRGEAFLL QGGDCAETFA ESSADNIRNK VKTILQMAVV LTYGASLPIV KMGRMAGQYA KPRSTGTETR DGVTLPAYRG DTINGHEFTA ASRTPDPARL LKAYHTSAAT LNLIRAFTMG GFADLRRVHE WNRGFMTNPS YKQYDELASE IDRAIRFMAA AGADFDALRT VEFFSSHEGL LLDYERPLTR IDSRTGLPYD CSAHFLWIGE RTRQLDGAHV DFFSRVHNPI GVKLGPTTSG DDALALMDAL NPDGVAGRLT FITRMGAGRI RDALPGVVEK VAADGRPVVW VCDPMHGNTI TSANGYKTRR FTDVIDEVRG FFEVHAATGT VPGGLHVELT GDDVTEVLGG AEEIDDVGLA RRYTTLVDPR LNHQQSLEMA FLVAEMLRER PTA
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