Gene Bcav_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1902 
Symbol 
ID7858295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2167475 
End bp2168413 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content76% 
IMG OID643865993 
Productglucokinase, ROK family 
Protein accessionYP_002881920 
Protein GI229820394 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID[TIGR00744] ROK family protein (putative glucokinase) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.132143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000235661 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGCCA TCGGGGTGGA CATCGGCGGG ACGAAGATCG CGGCCGGGGT CGTGGACCCC 
GACGGGAACG TCCTCCGCCT CGTCCGCCAC GGGACGAGCT CCGACGACCC GGCCGAGATC
GAGCGCGCGG TCGTCGACGC GGTCCAGGAG CTGCGCGCGG AGCACGAGGT CGGGGCAGTC
GGGGTCGCCG CCGCCGGGTT CGTCGACGCC GAGCGTTCCC GCGTCCGGTT CGCGCCCAAC
ATCGCGTGGC GGGACCACGC GCTGCGCGAC TCGCTCGCCA CACACATCGA CCTGCCGATC
GTCGTCGAGA ACGACGCCAA CGCCGCGGGG TGGGCCGAGT TCCGGTTCGG CGCCGGCCGC
GATGCCGAGC ACATGGTGCT GCTGACGGTA GGGACCGGTC TGGGCGGGGC GATCGTCACG
GGCGGCTCGC TCCTGCGCGG TGCGTTCGGC GCCGCCGGCG AGGTGGGGCA CATGCAGCTC
GTGCCCGACG GTCAGCTGTG CGGCTGCGGG CACGCCGGAT GCTGGGAGCA ATACGCGTCG
GGACGCGCGC TCGTGCGCGA CACGAAGGCC GCTCTCGTGA CGACGCCGGA GCGGGCCGAC
GCGCTGCTCC GCCTCGCGGG CGGCGATCCC GAGGACGTCA CCGGCCCGCA CGTCACCGAG
GCCGCACGCG CCGGGGACCC GCTGGCGCTC GAGCTCCTCG AGGACCTGGG GGCGGCGCTC
GGCACGGGGA TCGCGGACCT GGCGGCTCTG CTCGACCCGG AGGTCGTGGT CGTGGGGGGC
GGCGTGGCGG ACGCCGGGGA CCTGCTGCTC GCGCCCGCCC GCCGGGCGTT CACCGAGCAG
CTGTTCGCCC GTGGCTTCCG GCCGGAGCCC GTCATCGTCA CCGCACGGCT GGGCAACGAC
GCCGGCGTGG TCGGCGTCGC AGACCTGGCC CGCGGATAG
 
Protein sequence
MHAIGVDIGG TKIAAGVVDP DGNVLRLVRH GTSSDDPAEI ERAVVDAVQE LRAEHEVGAV 
GVAAAGFVDA ERSRVRFAPN IAWRDHALRD SLATHIDLPI VVENDANAAG WAEFRFGAGR
DAEHMVLLTV GTGLGGAIVT GGSLLRGAFG AAGEVGHMQL VPDGQLCGCG HAGCWEQYAS
GRALVRDTKA ALVTTPERAD ALLRLAGGDP EDVTGPHVTE AARAGDPLAL ELLEDLGAAL
GTGIADLAAL LDPEVVVVGG GVADAGDLLL APARRAFTEQ LFARGFRPEP VIVTARLGND
AGVVGVADLA RG