Gene Bcav_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1892 
Symbol 
ID7858285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2156151 
End bp2156786 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content67% 
IMG OID643865983 
Productcytochrome c oxidase subunit III 
Protein accessionYP_002881910 
Protein GI229820384 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.101725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000286925 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCGTCCG CAGCCGTCGC CCCGAGCGCA CACCTGAACA TCACCCGCCC GAACATGACG 
TCGGTGGGCA CCATCGTGTG GCTGTCCAGC GAGCTCATGT TCTTCGCCGG GCTCTTCGCC
ATCTACTTCA CCCACCGCGC CGTCGCGGGA CCGGAGGCCT GGGCGGAGGG CAGCGGCCTG
CTCAACCTCC CGTTCTCGAT CGGGAACACC ACGATCCTGG TGCTCTCGTC GGTGACGTGC
CAGGCCGGCG TGTTCGCCGC CGAGCGCTTC CAGGCGCGCC GCACGGGGTC GCTGCTCGAC
GTGCGCAAGT GGGGCATGGT CGAGTGGTTC ACCCTCACGT ACGTGATGGG TGCGATCTTC
GTCGCCGGCC AGGTCACGGA GTACGCGGAG CTCGTCGAGC ACGGCCTGAC GATCTCGTCC
ACGGCCTACG GCACCGTGTT CTACCTCGCC ACCGGCTTCC ACGGCCTCCA CGTGCTCGGC
GGCCTCATCG CGTTCCTGTT CGTGCTGGGC CGCGCGTTCA CCGCGCACCG CTTCGGCCAC
CACGAGGCCA CGAGCTCGAT CGTCGTGTCC TACTACTGGC ACTTCGTCGA CGTCGTCTGG
ATCGCCCTGT TCTTCGTCAT CTACATCCTC CGTTGA
 
Protein sequence
MSSAAVAPSA HLNITRPNMT SVGTIVWLSS ELMFFAGLFA IYFTHRAVAG PEAWAEGSGL 
LNLPFSIGNT TILVLSSVTC QAGVFAAERF QARRTGSLLD VRKWGMVEWF TLTYVMGAIF
VAGQVTEYAE LVEHGLTISS TAYGTVFYLA TGFHGLHVLG GLIAFLFVLG RAFTAHRFGH
HEATSSIVVS YYWHFVDVVW IALFFVIYIL R