| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1886 |
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| Symbol | |
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| ID | 7860508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 2149383 |
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| End bp | 2151167 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643865977 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_002881904 |
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| Protein GI | 229820378 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00704167 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATCG ACGAGATCAA CCGGATCGAC TCGGCCCCGC GCCCCGCGCT CGAGGAGGTG
CCCGGCCTGG CGCCGAAGCG CCAGCCGCTC GGACGCGCCG TCGTCGGCTG GCTCACCACG
ACCGACCACA AGACGATCGG CTACCTGTAC CTCGTCACGT CGTTCGTGTT CTTCTGCATC
GGCGGGGTGC TCGCGCTCCT CATCCGTGCC GAGCTGTTCG CTCCGGGGAT GCAGGTCGTC
CAGACGGGCG AGCAGTTCAA CCAGTTCTTC ACGATGCACG GCACGATCAT GCTGCTGCTC
TTCGCGACGC CGCTGTTCGT CGGGTTCGGC AACATCATGG TGCCGCTCCA GATCGGTGCG
CCCGACGTCG CGTTCCCGCG CCTCAACATG TTCGCGTACT GGCTCTTCGT GATCGGCGGG
ATCATCGCCG TCGCCGCCTT CTTCACGCCG AAGGGCGCGG CGAGCTTCGG CTGGACCGGC
TACGCGCCGC TCTCGCAGGA GACGTTCTCC CCGGGCGTGG GCGGCGACAT GTGGGTCGCC
GGCCTCGCGA TGACCGGTTT CGGCACGATC TTCGGCTCGG TCAACTTCAT CACGACGATC
GTCTGCATGC GCGCGCCCGG TATGACGATG TTCCGGATGC CGATCTTCAC CTGGAACATC
CTCATCACGT CGGTGCTGGC GCTCATGGCG TTCCCGGTGC TCACCGCCGC GCTGTTCGGT
CTGCTCGCGG ACCGGCGGCT CGACGCGCTG GTCTTCGACC CAGCCACCGG CGGGGCGATG
CTCTGGCAGC ACCTGTTCTG GTTCTTCGGG CATCCGGAGG TCTACATCAT CGCGTTGCCG
TTCTTCGGCA TCGTGTCGGA GATCTTCCCG GTCTTCAGCC GCAAGCCGCT CTTCGGCTAC
AAGACGCTGG TGTTCGCCAC CATCGCGATC GCCGGACTCT CGGTGACGGT GTGGGCGCAC
CACATGTACA CGACCGGCGC CGTGATGCTG TCGTTCTTCG CGCTCATGAC GATGCTCATC
GCCGTCCCGA CGGGTGTGAA GTTCTTCAAC TGGATCGGCA CGATGTGGCG CGGGAAGCTC
ACGTTCGAGA CGCCGATGCT GTGGTCGATC GGGTTCCTCG TCACGTTCCT GTTCGGCGGT
CTGACGGGCG TGATCCTGTC CAGCCCGACG CTCGACTTCC ACCTGCACGA CACGTACTTC
GTCGTCGCCC ACTTCCACTA CGTCGTGTTC GGCACCGTGG TGTTCGCGAT GTTCGCCGGC
TTCTACTTCT GGTGGCCGAA GTTCACCGGG AAGATGCTCG ACGAGCGCCT CGGCAAGTGG
CACTTCTGGC TGCTCTTCGT CGGCTTCCAC ACGACGTTCC TCATCCAGCA CTGGCTGGGC
GTCAAGGTCA TGCAGCGCCG GATCGTCGAC TACCTGCCGG AGGACGGCAT CCAGCTGTGG
AACCAGATCT CCACGGTCGG TGCGTTCGTG CTCGCGGCGT CGACGCTGCC GTTCCTCTGG
AACGTCTACA AGACGTGGCG GCAGGCGCCG CAGGTCACCG TGGACGACCC GTGGGGCTAC
GGCCGGTCGC TCGAGTGGGC GACGTCGTCC CCGCCGCCCA GGCACAACTT CGTCACCCTG
CCGCGGATCC GCTCCGAGTC GCCGGCGTTC GACCTGCACC ACCCGGAGGT CGCGGCCATG
GACCGGGCGG AGCCCGACCC TGGGTTCCTC GACCAGGTCT ACGGGAACGC CGACATGCAG
GGATCGATCC AGGAACGCCA GACGACGAAG GAGGACCAGT CGTGA
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| Protein sequence | MAIDEINRID SAPRPALEEV PGLAPKRQPL GRAVVGWLTT TDHKTIGYLY LVTSFVFFCI
GGVLALLIRA ELFAPGMQVV QTGEQFNQFF TMHGTIMLLL FATPLFVGFG NIMVPLQIGA
PDVAFPRLNM FAYWLFVIGG IIAVAAFFTP KGAASFGWTG YAPLSQETFS PGVGGDMWVA
GLAMTGFGTI FGSVNFITTI VCMRAPGMTM FRMPIFTWNI LITSVLALMA FPVLTAALFG
LLADRRLDAL VFDPATGGAM LWQHLFWFFG HPEVYIIALP FFGIVSEIFP VFSRKPLFGY
KTLVFATIAI AGLSVTVWAH HMYTTGAVML SFFALMTMLI AVPTGVKFFN WIGTMWRGKL
TFETPMLWSI GFLVTFLFGG LTGVILSSPT LDFHLHDTYF VVAHFHYVVF GTVVFAMFAG
FYFWWPKFTG KMLDERLGKW HFWLLFVGFH TTFLIQHWLG VKVMQRRIVD YLPEDGIQLW
NQISTVGAFV LAASTLPFLW NVYKTWRQAP QVTVDDPWGY GRSLEWATSS PPPRHNFVTL
PRIRSESPAF DLHHPEVAAM DRAEPDPGFL DQVYGNADMQ GSIQERQTTK EDQS
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