Gene Bcav_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1884 
Symbol 
ID7860506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2147391 
End bp2148362 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content74% 
IMG OID643865975 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_002881902 
Protein GI229820376 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.241039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00501682 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGCCGTA CCGTCCCTCA CCTGATCGTC ACGGCCGTCG CCGCGGCGCT CGTGCTCGCC 
GCCTGCAGCT CGGGCGAACC CGCCGGCTCC GAGGGGTCCG AGGAACCGAC CTCGAGCGCG
TCGGGTGACA CCGCCAGCGG CGCCACGGAG GCGACCGACC TGTTCGAGGC GTCCGGCGCG
TTCGGCGAGA AGCCGACGCT GACGTTCCCG GGCGAGACCC CGCCCGAGGG CCTCCAGGCG
GAGGTGCTGA GCGAGGGTGA CGGACCCGTC GTCGAACCGG GATCGGTCGT CGCGGCGCAC
TACCTCGGCC AGGTCTGGGG ATCCGACACA CCGTTCGACA ACTCCTACGA CGGCGGCGCC
GCCGTCCCGT TCAGCCTCAA CACCGTCGTC GCGGGCTGGA CACAGGGGAT CCCGGGGCAC
GCCGTCGGCA GCCGGATCCT CCTGAGCATC CCCGCCGACC TCGGCTACGG CCCGCAGGGC
GGGAACGCGC AGGCCGGGAT CGGCGCGGAG GACACGATCG TGTTCGTCGT CGACATCGTG
GAGGCGTTCG GTCCTGAGGT CGTCGGCGAG GCGGGTGCCG AGCCGACGGG CGAGGAGCTG
CCCGTGACGT ACGACGGCGA GCTCGGCGAG CCGGTGTCCG GTGTCACGCT GGTCGAGGGC
GCCACGCTCG CCGCCGAGCC GACGAGCACG ACGATCGCCA CGGGCACGGG CGAGCCGATC
GCGGCGGGTC AGGGCGTCGT CGCTCAGTAC GCGCTGACGA GCGAGGACGG CGCCTCGCAG
GCGTCGACGT GGGACACGTC GCAGGAGGGG TTCGGCCCGA TCGCCGCGGC GGTCGGCTCG
GGCACGTTCC TCGACCTCGT CGAGGGGGTG CCGATCGGCA GCCGGGTGCT CGTCCAGCTG
CCCGGGAACG ACCAGCAGCC GAGCGCGCTC GCCGTCGTCG TCGACCTCGT CGCGGTGGCG
CCCCAGGGGT GA
 
Protein sequence
MRRTVPHLIV TAVAAALVLA ACSSGEPAGS EGSEEPTSSA SGDTASGATE ATDLFEASGA 
FGEKPTLTFP GETPPEGLQA EVLSEGDGPV VEPGSVVAAH YLGQVWGSDT PFDNSYDGGA
AVPFSLNTVV AGWTQGIPGH AVGSRILLSI PADLGYGPQG GNAQAGIGAE DTIVFVVDIV
EAFGPEVVGE AGAEPTGEEL PVTYDGELGE PVSGVTLVEG ATLAAEPTST TIATGTGEPI
AAGQGVVAQY ALTSEDGASQ ASTWDTSQEG FGPIAAAVGS GTFLDLVEGV PIGSRVLVQL
PGNDQQPSAL AVVVDLVAVA PQG