Gene Bcav_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1871 
Symbol 
ID7860493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2136253 
End bp2136906 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content73% 
IMG OID643865962 
Producthypothetical protein 
Protein accessionYP_002881889 
Protein GI229820363 
COG category[S] Function unknown 
COG ID[COG5578] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.339644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.566269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCAC GCTCGCCCGA CGGCGCCGGC CCTTGGTCGC GGGTCGTCGA TCTCCTGGCG 
GGGTTCTGGC GGGCGGTCGG GATCAACGCC CTGTGGCTCG TGGCGTCGCT GCCGATCGTG
ACGATCGGAC CCGCGACCGT CGCGCTCATG GCGATGGCGC GGGACGACGT CATGGGTCGT
CCTCGCCCGG CGGCCCGTGC GTTCGTGGCG TACGTCCGCG AGAACGTCGC CGTCGGCCTG
GCACTGTCGA CCATGACGCT GGGCGCCGTC GGCTCCTTCG CGCTGCTCTG GCGCCTTGAC
CCCGCCGGGG GGACGACGGC GACCCGTGTG CTGCAGGTCG TGTCGCTCGT GGGCCTGATC
GCCGTGGCCC CGGTGATCGC GCACGGGTAC GCGCTGGCGG CGCACACCCA GCAGGGCGTG
CGTGGGGTGT ACCGGGCGAG CGTGATCATG GCGTTCGCCC GGCCCGGCGA GACCGTGCTG
GCGCTCGCGG TCGTGGCGGC CCTCGTGCTG CTGTCCTGGT ACTGGCCGTT CTCCGTGCTG
CTCGCAGGCT ACGTCGGGTC GCGCGCCATC TTCACGACCT TCCGGCGCAC GTTCGCGGCG
CTCCAGGACC CGAAGGGCGC GAGCGATGAC GCTCCAGCAG ACGCGCGCTC CTGA
 
Protein sequence
MTSRSPDGAG PWSRVVDLLA GFWRAVGINA LWLVASLPIV TIGPATVALM AMARDDVMGR 
PRPAARAFVA YVRENVAVGL ALSTMTLGAV GSFALLWRLD PAGGTTATRV LQVVSLVGLI
AVAPVIAHGY ALAAHTQQGV RGVYRASVIM AFARPGETVL ALAVVAALVL LSWYWPFSVL
LAGYVGSRAI FTTFRRTFAA LQDPKGASDD APADARS