| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1870 |
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| Symbol | |
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| ID | 7860492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 2134778 |
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| End bp | 2136256 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643865961 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002881888 |
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| Protein GI | 229820362 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.440802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.959587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAC GACGGGGGCG GCGATTGTCG GTCGCTGCCA TTTCTGCCAT TGTTCTGCTA
TCCGCCGGAT GCTCGGTCCT GGGCGGTGGG GACAATGACG AGGAACGGGT CCTGAGAATC
AACTACGGCG GGTCGGCCGA CGTGACAGAG ATCCCGGCCG ACAACCCGAT CGCCGACAAG
CTCGAGGAGA TCACCGGGTA CGAGATCGTC GTCGAGAAGT CCCCGGAGGA CCTCGGCGCC
GCCCTGGCGG GCGACCAGGC GCCGGACCTC TTCCTCACGA GCCGGAGCCA GGTGCGTCAG
TTCGACGAGC AAGGGCTCCT GCTCGACCTC ACGGACCACC GCGACGAGCT CAGCGACTAC
GAGAGCTACG TCGGCTCCGA GAACGTCGAC GCCACGCTGC TGGACGGTCG GCTCGTGAGC
GTGGTCCGCA AGCCTCGCGA GTTCAGCTAC AACGGCTTGT GGATCCGCGC GGACTGGTTG
GAGAACCTCG GGCTCGCTAT GCCGACGACG ACGGCCGAGT TCCACGACGT GCTCCAGGCG
TTCACGACCG GTGACCCGGA CGGCAACGGC GCCGCCGACA CCGTCGGCAT CACGGGCTCC
GGCATGGGCA CGTTCTCGGC GGTCTTCGGC GCGTACGGCA CCGGGGGACC CGGCACGCTC
TACGCCGACG GCCCGGCGAT CGTCGACGGC TACAACGACC CGGCCGTGAT CGAGCCGCTC
ACGTACATCA ACACGCTGTT CGCGGAGCAG CTCGTCGATC CGGACCTGTT CTCGATCGAG
ATCGCGGAGG CGCGGGACCG GGCGTTCCAG GGCAGCGCCG GCGTCGTCGC GATCAGCTGG
GACCAGATGA CGAAGCCGGA GTTCGTGGAG GCGCAGCAGG CGGCCCAGCC GGGCTCCGAC
TGGCAGATGA TCTCGGTGCT GGACGGGCCG GACGGCCCCG GCGCTCAGCC GGGCAGCCCG
TTCGGCGTGG TCCAGGCGAT CCCCGCGTCG GTCGGGGACG ACCCCGACAA GGTCGAGGCC
CTCATCACGC TCCTCAACTA CATCTCGACG CCGGACGGGT CGCGACTCGT CATGTTCGGC
GTCGAGGGCG AGACGTTCGA GATGGACGGC GAGGAGGTCG TCCCGCTGCC CGCGCTGGAC
ACCGAGGGCT CCTACTTCTT CGCCTACCAG ATGACCGGGC GCGACGAGGA CACGTACCTC
GCGACGAAGT TCCCGGACGA GGCCTGGGCG TGGCAGGCGT GCATGGACCG CGAGCAGATC
GTGCTGTACG ACGCCCTGGT GGCGCCGCCG GACGGGTACA ACGTGGCCGA CGCCGCCCGG
TTCGCCGACG AGCAGATCGT GCTCTTCGTG ACCGGCGAGC GGCAGCTGAC GGACTACGAC
GCGTTCCTCT CCGAGCTCAA CGGGCAGTTC GGCTACGCCG AGTACGTCAG CTCCGCGCAG
GAGCAGCTCG CCGCCCTCGG CCTCCCGGCG TCCTCGTGA
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| Protein sequence | MTSRRGRRLS VAAISAIVLL SAGCSVLGGG DNDEERVLRI NYGGSADVTE IPADNPIADK
LEEITGYEIV VEKSPEDLGA ALAGDQAPDL FLTSRSQVRQ FDEQGLLLDL TDHRDELSDY
ESYVGSENVD ATLLDGRLVS VVRKPREFSY NGLWIRADWL ENLGLAMPTT TAEFHDVLQA
FTTGDPDGNG AADTVGITGS GMGTFSAVFG AYGTGGPGTL YADGPAIVDG YNDPAVIEPL
TYINTLFAEQ LVDPDLFSIE IAEARDRAFQ GSAGVVAISW DQMTKPEFVE AQQAAQPGSD
WQMISVLDGP DGPGAQPGSP FGVVQAIPAS VGDDPDKVEA LITLLNYIST PDGSRLVMFG
VEGETFEMDG EEVVPLPALD TEGSYFFAYQ MTGRDEDTYL ATKFPDEAWA WQACMDREQI
VLYDALVAPP DGYNVADAAR FADEQIVLFV TGERQLTDYD AFLSELNGQF GYAEYVSSAQ
EQLAALGLPA SS
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