Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1866 |
Symbol | |
ID | 7860488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2129576 |
End bp | 2131186 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643865957 |
Product | hypothetical protein |
Protein accession | YP_002881884 |
Protein GI | 229820358 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5434] Endopolygalacturonase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0181178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.966221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTTC CCGAGACGAA CCTCGACCGA CGGACGGTAC TGGCGCTCGC CAGCGCAGGC ACGGCAGGGG CGGCGCTCGC CGCGTCAGCG GCCCCGGCCG CTGCCGCTGC CGCCCCAGCG GGTGCCGGTC CCACGGCGGT GGTCACGGAC TTCGGCGCCG ACCCCACAGG CGTCGAGCAC GCCGGCGCCG CGTTCCAGGC GTGCCTCGAC TCCCTGCCTC CGAGCGGCGG CACCGTCCTC GTCCCGCCGG GCACGTACCT GCTCGCGGGG CAGCAGGTCG TTGAGCTCCG GTCCAACCTC ACGATCGAGG GCGCCGGCGC CACCATCGTG CGGCGCGAGC GCACCGGCAG CTACACCGCG TTCACCGGTC TGTCCCACGG TCGCCAGGGC CGGCGTTCGG GCGTGGTGAA CGTGACGATG CGGGGCCTGC GGTTCCGCGG CGACTTCACC GCCCGGGCGA CGATCTGCGT GATGGCCCTG CACCACTGCG CCGACATCCG GATCGAGGGC TGCGAGTTCG TCGAGTGCCA GGGCGGCGCC GGGCACACCT TCGACCTCAA CGGCTGCGAC GACATCACGT TCACCGACTG CACGTGGCGC GGCTACCACT CGGTGCCCAC GCACGCCCCG ACGATCGAGA CCATCCAGCT CGACGCGTCC CACTCCTCCG CCGTCTCCTA CCCGGACGAC CCCGGCTCCT ACGACGCCCT CTCCACCCAC CACGTGACGA TCGAGCGCTG CCGGTTCCTC CCGCTCGACC TCGACGCGGA ACCCGGCGCC GTCGTCCCGG CGGACCACGC GCGCAGCTTC CCGGCGCCGA ACCCCGTGGG CGCGCACCAC TCCGCGTACG AGCAGGCCTA CGTCGGGCTC GTCATGCGGG ACGTCGAGGT CGTCGACCCC GTGTCGGACC CGAGGCCGGC CCAGAACCAG GACAACGCGG CCGTCCGCGG CGTCATCCAC GTGCCGCAGG CCCGTGACGT TCTCCTGGAG AACGTCACGG TGCGCTCCAC CACGGGCGCC GTCTCGAACC GCGTCGTGAT GCTCTCCTCG ATGTCGTACG GCCACATCGC GTCCGCCGAC GACGTGCCCG GGCCGAAGGG CTACTACCCC GAGCCCATGC GGTGCGCGGA CGTCACGATC CGCAACCTCG TGGTCGAGGG TTTCACCGCC GTCGAGGGTG AGGACCCGGC GCAGAACCCG ATCATCGTCG TCAGCGGGGT GGATGAGGGC CCGGCGGAGA ACATCGACAT CCAGGCGAGC ATCCACGGCG ACGTGACCAC CGCCGTCCTC GTGGAGAAGG CGCGCAACGT ACGCCTCGCC CTCGAGATCA CCGGTTCCGC CCGGGGTGTG GACGTCACCG ACAGCTCCGG GCTGAACGTC GCCGGCGGTC GTTTCGACGA CGTCGGCACC CCCGTGGTCC TCACCGACGT CGAGCGTTTC ACGATCGCCG GCGTCGTCGG GACGCACTCC GGGACCCAGC CGGTCGCCGT CGTCATGGAC GACCTCACCG ACCACGGTGT GATCGCGGGC ACGCGGTGGT CGGGCTACGA GGCCGTCGCC ACCGGCGGCG GCCACCACGT GATCGAGCGC GGGAACCGCG CGACGCCCTG A
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Protein sequence | MAFPETNLDR RTVLALASAG TAGAALAASA APAAAAAAPA GAGPTAVVTD FGADPTGVEH AGAAFQACLD SLPPSGGTVL VPPGTYLLAG QQVVELRSNL TIEGAGATIV RRERTGSYTA FTGLSHGRQG RRSGVVNVTM RGLRFRGDFT ARATICVMAL HHCADIRIEG CEFVECQGGA GHTFDLNGCD DITFTDCTWR GYHSVPTHAP TIETIQLDAS HSSAVSYPDD PGSYDALSTH HVTIERCRFL PLDLDAEPGA VVPADHARSF PAPNPVGAHH SAYEQAYVGL VMRDVEVVDP VSDPRPAQNQ DNAAVRGVIH VPQARDVLLE NVTVRSTTGA VSNRVVMLSS MSYGHIASAD DVPGPKGYYP EPMRCADVTI RNLVVEGFTA VEGEDPAQNP IIVVSGVDEG PAENIDIQAS IHGDVTTAVL VEKARNVRLA LEITGSARGV DVTDSSGLNV AGGRFDDVGT PVVLTDVERF TIAGVVGTHS GTQPVAVVMD DLTDHGVIAG TRWSGYEAVA TGGGHHVIER GNRATP
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