| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1862 |
|---|
| Symbol | |
|---|
| ID | 7860484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2124111 |
|---|
| End bp | 2125991 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865953 |
|---|
| Product | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_002881880 |
|---|
| Protein GI | 229820354 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.426511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.956512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAA CCGTCAAGAT GCCGGCCCTC GGTGAGAGCG TGACCGAGGG CACGGTCACC
CGGTGGCTCA AGGCCGTGGG AGACACGGTG GCGGTCGACG AGCCGCTGCT GGAGGTCTCG
ACCGACAAGG TGGACACCGA GATCCCGTCG CCGATCGCGG GCGTGCTGCA GAAGATCCTC
GCGGAGGAGG ACGACACCGT CGAGGTCGGC GCCGACCTCG CCGTCATCGG AGCCGACGCC
GAGGCAGCGT CCGACGAGGG CGCTCCCGAG GCTCCCGCCG CCGAGGGCCA GGCCGAGGCT
GCGCCCGAAG CAGGGGCCGA AGCACCGGCC GAGGAGGCCC CGCAGCAGGC CGCCGAGGAG
CAGCCGCCGG CACCGGAGCC CGCCCCCGAG CCGGAGCAGG CCGCTCCCGC GGAGGAGTCG
GCTCCCGCAC CCGCCGCCCA GGCCGAGCAG CCCGCCGCGG CGGCGTCCGC CGAGGCCGGT
ACCGACGTCA CGCTGCCCGC TCTGGGCGAG AGCGTCACCG AGGGCACGAT CACGCGGTGG
CTCAAGGCCG TCGGTGACGA GATCGCCGTC GACGAACCCC TGCTCGAGGT CTCGACCGAC
AAGGTCGACA CGGAGATCCC GTCGCCCGTC GCCGGCACCG TCCTCGAGAT CCTCGCCGCG
GAAGACGAGA CGGTCGAGGT CGGAGCGGTG CTCGCGCGGG TCGGCGCGGC CGCGCCCGAG
GCGAAGGCCC CGGAGCCCGA GCCGCAGGCA GCGCCGGAGC CGGAGCCGGC TGCAGCGGAG
CCCGAGGAGG CCAAGGCGGA GCCCTCCGCA GCGGAGCCGG AGCAGGCCGC GGCCCCCGAG
CCCGAGCCCG CCCCGGCGGC ACCAGCCCCC GCGCCGGCGG CCGCGGCACC GGCGGCGACG
ACGCCCGAAC CCGCTCCCCG TCCGAGCGCC GCCGAGGCGC TCTCCGGCAC GAGCACCACG
TACGTCACCC CGCTCGTGCG CAAGCTGGCG GGGCAGCACG GGGTCGACCT CGAAGGGCTC
ACCGGCACGG GCGTCGGCGG GCGGATCCGC AAGCAGGACG TGCTCGACGC CGCCGAGGCC
GCGAAGGCCG CGGCTGCTGC CCCGGCCGCG GCAGCTCCCG CCGCTCCGGC CGGCCCGGCC
GCGACGGTGC TTCCCGTCTC CCCGCTCCGG GGAACGCGCG AGAAGATGTC GCGCCTGCGC
AAGATCGTCG CGCAGCGCAT GGTCGAGTCG CTCCAGGTGT CGGCCCAGCT CACCACGGTG
GTCGAGGTGG ACGTCACCCG CATCGCTCGA CTGCGGGACC GTGCGAAGGC GGACTTCGCA
ACCCGTGAGG GTGCGAAGCT CACCTACCTC CCGTTCTTCG CGCTCGCCAC CACCGAGGCG
CTCAAGGCCT ACCCGAAGCT CAACGCGAGC ATCGAGGGCG AGGAGATCGT CTACCACGGT
GCCGAGAACG TCGGGATCGC CGTCGACACG GACCGCGGCC TCGTGGTTCC CGTGGTCAAG
GACGCCGGAG ACCTGAACAT CGCCGGCTTC GCCCGCAAGA TCGCCGACCT CGCGTCCCGG
ACCCGCGCCA ACAAGGCCGT GCCGGACGAG CTCAGCGGCG GCACGTTCAC GCTGACGAAC
ACGGGCAGCG GCGGTGCCCT GTTCGACACG CCGATCCTCC TGCAGCCGCA GGTCGGCATC
CTCGGCATCG GCACGATCGT CAAGCGGCCG ATGGTCGTGA AGGACGCCGA CGGCGCCGAG
GTGATCGCCG TGCGGTCGAT GGTGTACCTC GCGCTGAGCT ACGACCACCG GCTCGTCGAC
GGCGCGGACG CGGGTCGCTT CCTCACCGCC ATCAAGAACC GCCTCGAGGA GGGCGCGTTC
GAGTCCGACC TCGGGCTCTG A
|
|---|
| Protein sequence | MSETVKMPAL GESVTEGTVT RWLKAVGDTV AVDEPLLEVS TDKVDTEIPS PIAGVLQKIL
AEEDDTVEVG ADLAVIGADA EAASDEGAPE APAAEGQAEA APEAGAEAPA EEAPQQAAEE
QPPAPEPAPE PEQAAPAEES APAPAAQAEQ PAAAASAEAG TDVTLPALGE SVTEGTITRW
LKAVGDEIAV DEPLLEVSTD KVDTEIPSPV AGTVLEILAA EDETVEVGAV LARVGAAAPE
AKAPEPEPQA APEPEPAAAE PEEAKAEPSA AEPEQAAAPE PEPAPAAPAP APAAAAPAAT
TPEPAPRPSA AEALSGTSTT YVTPLVRKLA GQHGVDLEGL TGTGVGGRIR KQDVLDAAEA
AKAAAAAPAA AAPAAPAGPA ATVLPVSPLR GTREKMSRLR KIVAQRMVES LQVSAQLTTV
VEVDVTRIAR LRDRAKADFA TREGAKLTYL PFFALATTEA LKAYPKLNAS IEGEEIVYHG
AENVGIAVDT DRGLVVPVVK DAGDLNIAGF ARKIADLASR TRANKAVPDE LSGGTFTLTN
TGSGGALFDT PILLQPQVGI LGIGTIVKRP MVVKDADGAE VIAVRSMVYL ALSYDHRLVD
GADAGRFLTA IKNRLEEGAF ESDLGL
|
|---|
| |