Gene Bcav_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1847 
Symbol 
ID7860469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2105651 
End bp2106484 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content73% 
IMG OID643865938 
Product3-methyl-2-oxobutanoatehydroxymethyltransferase 
Protein accessionYP_002881865 
Protein GI229820339 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCC CCGCACCGGA GCCCGCCCCC AAGCCGACGC GCGTGCGCGT CCAGCACCTG 
CGTGCCGCGA AGGAGCGCGG CGAGCGCCTG ACGATGCTGA CGGCGTACGA CGCCGTCACC
GCGCGGATCT TCGACGCCGC GGGCGTCGAC ATGCTCCTCG TCGGCGACTC CATCGGCGAC
AACATGCTCG CCCACCCGAA CACGATCCCG GTGACGATGG ACGAGCTCAT CCCCGCGGTC
CGTGCGGTCA GCCGAACGGT GAGACGAGCC ATGGTCGTGG CCGACCTGCC GTTCGGCTCC
TACGAGGCGT CGCCCGAGCA GGCGCTGGCG AGCTCGGTCC GGATGCTGAA GGAGGGCGGC
GCGCACGCGG TGAAGTTCGA GGGCGGCGAA CGCGTCGCGC CGCACGTCGC GCTCCTCACC
GGAGCCGGGA TCCCGGTGGT GGGCCACCTC GGCTTCACGC CGCAGTCCGA GAACATCCTC
GGTGGCAAGC GCGTCCAGGG GCGGACGGCG GAGGCCGCCG AGCAGCTGTC GGCCGACGCC
GTCGCGCTCC AGGAGGCGGG CGCCGTCGCC GTCGTCCTCG AGATGGTCCC CGCCCCCGTG
GCCGCACGGG TGACGGAGAT CCTGGCGATC CCCACGATCG GGATCGGAGC GGGTCCGACG
TGCGACGGGC AGGTGCTCGT GTGGACCGAC ATGGCCGGCA TGGGCGGCTG GTCACCGCGG
TTCGCGAAGC AGTTCGGGCA GGTCGGCGCC GCGCTGGAGC AGGCGGCGCG GGACTTCGCG
GACGAGGTCC GGACCGGGAC CTTCCCGGCG GCCGAGCACG CCTACTGGGA GTGA
 
Protein sequence
MTGPAPEPAP KPTRVRVQHL RAAKERGERL TMLTAYDAVT ARIFDAAGVD MLLVGDSIGD 
NMLAHPNTIP VTMDELIPAV RAVSRTVRRA MVVADLPFGS YEASPEQALA SSVRMLKEGG
AHAVKFEGGE RVAPHVALLT GAGIPVVGHL GFTPQSENIL GGKRVQGRTA EAAEQLSADA
VALQEAGAVA VVLEMVPAPV AARVTEILAI PTIGIGAGPT CDGQVLVWTD MAGMGGWSPR
FAKQFGQVGA ALEQAARDFA DEVRTGTFPA AEHAYWE