Gene Bcav_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1839 
Symbol 
ID7860461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2099723 
End bp2100931 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content77% 
IMG OID643865930 
Productimidazolonepropionase 
Protein accessionYP_002881857 
Protein GI229820331 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0849054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0558916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGT CGACCCTCGT CACCGGCATC GCGGAGCTCG TGACCAACGA CCCCGCGCTC 
GGTGAGGGCC CGCTCGGGAT CCTGCACGAG GCGGCGATCG TCGCCGTCGC TGAGCCCGGG
GCCGACGACG GCGCGGCGCC GCTGGGTGGC CGGGTCGCCT GGGTGGGTCC CGCCTCGGGC
GCCCCCGCGG CGGACCGCGC GATCGACGTC GCGGGCCGCG CCGTCGTGCC CGGGTTCGTC
GACTCGCACA CGCACCTCGT GTTCGCGGGC GACCGCTCCG CGGAGTTCGC GGCCCGGATG
GCGGGGGAGC GCTACGACGG CGGCGGGATC GCCTCGACGG TCGGCGCGAC ACGGGCGGCG
TCCGACGACG AGCTCCGGGC GCGCCTCGCC GGCTTCGTCG CCGAGGCCCG CGCCCAGGGC
ACCACGACGC TCGAGGTCAA GAGCGGCTAC GCGCTCGACG TCGACGGCGA GGCGCGGCTG
CTGCGCCTCG CGCGCGAGGT CACCGACGAG ACGACGTTCC TCGGTGCGCA CGTGGTGCCT
GCGGAGTACG TGGGGCGCAC CGACGAGTAC GTGGCGCTGG TCACGGGCGA CATGCTCGCT
GCGTGTGCCC CGCACGCCCG GTGGATCGAC GTGTTCTGCG AGCCGGCGTC ACCGCATGCG
TTCGACGGCG ACGCCGCCCG CGAGGTCCTG CTCGCGGGCC GGGGCGCGGG GCTCGGCCTG
CGGGTGCACG CCGGTCAGCT CGCCCCGGGG CCTGGCGTCG GCCTGGCGGT GGAGCTCGGC
GCCGCGAGCG TCGACCACGG GACGTACCTG ACGCCGTCGG ACGTGGCGGC CCTGGCGTCG
TCCGAGACCG TCCTGACGCT GCTGCCCGGC GTGGAGTTCT CGACCCGGTC GCCCTATCCC
GACGCTCGCG CGCTGCTCGA CGCGGGCGTG GCGGTCGCCC TCGCGTCGGA CTGCAACCCC
GGCACGTCCT TCACCTCGTC GATGCCGCTC GTCGTCGCTC TGGCCGTCCG TGAGATGGGG
ATGACGCCGG CGGAGGCACT GTGGGCGGCG ACGGCGGGCG GGGCGCGGGC GCTGCGGCGC
GACGACGTCG GGCACCTCGG CGTCGGGGCG CGGGCCGATC TGGCCGTGCT GGAGGCGCCG
TCGTACGTCC ACCTGGCCTA CCGCCCCGGC GTGCCGCTCG CGACGGCGCT CGACCTCCCG
GGGGCCTGA
 
Protein sequence
MATSTLVTGI AELVTNDPAL GEGPLGILHE AAIVAVAEPG ADDGAAPLGG RVAWVGPASG 
APAADRAIDV AGRAVVPGFV DSHTHLVFAG DRSAEFAARM AGERYDGGGI ASTVGATRAA
SDDELRARLA GFVAEARAQG TTTLEVKSGY ALDVDGEARL LRLAREVTDE TTFLGAHVVP
AEYVGRTDEY VALVTGDMLA ACAPHARWID VFCEPASPHA FDGDAAREVL LAGRGAGLGL
RVHAGQLAPG PGVGLAVELG AASVDHGTYL TPSDVAALAS SETVLTLLPG VEFSTRSPYP
DARALLDAGV AVALASDCNP GTSFTSSMPL VVALAVREMG MTPAEALWAA TAGGARALRR
DDVGHLGVGA RADLAVLEAP SYVHLAYRPG VPLATALDLP GA