| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1837 |
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| Symbol | |
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| ID | 7860459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 2096456 |
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| End bp | 2098036 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 643865928 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_002881855 |
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| Protein GI | 229820329 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0180395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCG CAGTCTCCGC CGTCCCGCCC GAACCGGCGG ACGTCGTCGT CCATCTCGGA
ACGGGGCCGG TGAGCGCCGC CGACGTCGTC GCCGTCGCCC GGCACGGTGC TCGCGTCGAG
CTCGCCCCCG AGGCGGAGGC CGCGATCCGC GACGGGCGCG CCGTGGTCGA CACGCTGGCC
GCCGACGACG CCCCGCACTA CGGCGTCTCC ACCGGTTTCG GAGCCCTCGC CACCACGCAC
ATCCCGCCCG GGCGCCGCGC CCAGCTGCAG GCGAGCCTCA TCCGGTCCCA CGCCGCGGGC
GCCGGACCCG AGGTGGAGCG TGAGGTCGTG CGCGCGCTCA TGCTGCTGCG CGCGTCGACC
CTCGCGACGG GACGCACCGG CGTGCGCCTC GAGACCGCCC AGGCGTACGC CGCGCTCCTG
AGCAGCGGGC TCACGCCCGT CGTGCACGAG CACGGCTCGC TCGGGTGCTC GGGCGACCTC
GCCCCCCTGG CGCACGTGGC GCTCGCGCTC CTCGGCGAGG CAACGGTCCG CACGCCCGAC
GGCGTCGCCC GGCCGGCGGC CGAGGCGCTC GACGCGGCGG GGCTGGCCCC GGTGGTGCTT
GCCGAGAAAG AGGGTCTGGC CCTCATCAAC GGCACGGACG GCATGCTGGG GATGCTCGTG
CTCGCGAACC ACGACCTGCG GGAGCTGCTC CGGGTCGCCG ACGTCGCCGC CGCGATGAGC
GTCGAGGCGC TCCTCGGGAC GGACGCCGCG TTCGCCGCCG ACCTCGTGGC GATGCGCCCG
CATCCCGGTC AGGCCGACTC CGCGGGGAAC CTCCGCGCGC TGCTCGCCGG CTCGGCGATC
ATGGCGAGCC ACCGCGGCCC GGAGTGCACG CGCGTGCAGG ACGCCTACTC GCTGCGCTGC
GCACCCCAGG TGCACGGTGC GGCGCGCGAC ACCCTCGCGC ACGCCGCCGC CGTCGCCGAA
CGCGAGCTGG CGGCGGCCAT CGACAACCCG GTCGTGACGC CGGACGGGCG CGTGGAGTCG
AACGGGAACT TCCACGGCGC ACCCGTCGGC TACGCGCTGG ACTTCCTCGC CATCGCCGTC
GCCGACGTCG CGAGCATGAG CGAGCGGCGC ACCGACCGCT TCCTCGACCG CTCCCGCAGC
CAGGGCCTGC CGCCGTTCCT CGCGCACGAG GTCGGCGTCG ACTCGGGGCT GATGATCGCG
CAGTACACGG CGGCCGGGAT CGTCTCCGAG CTCAAGCGGC TGGCCGTGCC CGCCAGCGTG
GACTCGATCC CGAGCTCCGC CATGCAGGAG GACCACGTCT CGATGGGGTG GTCGGCCGCG
CGCAAGCTGC GGCTCGCCGT CGCCGGCCTG CGCCGCGTCC TCGCGATCGA GCTGCTCACG
GCGGCCCGGG CGATCGACCT GCGCGCGCCG CTCACGCCGT CGCCGGCCAC CGGCGCCGTC
CGCGACGCGG TGCGCTCCGC GGGTGTCGCG GGTCCCGGCC CCGACGAGCA CCTCAGCCCA
CAGATCGAGG CCGTCGCGGC CGCCGTCGCG ACGGGCACGC TGCGTACCGC AGCGGAGTCC
GTGGCCGGGC CGCTGCGCTG A
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| Protein sequence | MSSAVSAVPP EPADVVVHLG TGPVSAADVV AVARHGARVE LAPEAEAAIR DGRAVVDTLA
ADDAPHYGVS TGFGALATTH IPPGRRAQLQ ASLIRSHAAG AGPEVEREVV RALMLLRAST
LATGRTGVRL ETAQAYAALL SSGLTPVVHE HGSLGCSGDL APLAHVALAL LGEATVRTPD
GVARPAAEAL DAAGLAPVVL AEKEGLALIN GTDGMLGMLV LANHDLRELL RVADVAAAMS
VEALLGTDAA FAADLVAMRP HPGQADSAGN LRALLAGSAI MASHRGPECT RVQDAYSLRC
APQVHGAARD TLAHAAAVAE RELAAAIDNP VVTPDGRVES NGNFHGAPVG YALDFLAIAV
ADVASMSERR TDRFLDRSRS QGLPPFLAHE VGVDSGLMIA QYTAAGIVSE LKRLAVPASV
DSIPSSAMQE DHVSMGWSAA RKLRLAVAGL RRVLAIELLT AARAIDLRAP LTPSPATGAV
RDAVRSAGVA GPGPDEHLSP QIEAVAAAVA TGTLRTAAES VAGPLR
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